PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN35100.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ERF
Protein Properties Length: 179aa    MW: 19402.4 Da    PI: 5.0279
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN35100.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.3e-161663253
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53
                + kGVr++k +g+Wv+eIr+p   g +  r +lg++ t+e Aa a++ a  +l
  KHN35100.1 16 KLKGVRRRK-WGKWVSEIRVP---G-TqERLWLGTYATPEAAAVAHDVAVYCL 63
                679***998.**********8...3.35********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.63E-161675IPR016177DNA-binding domain
PfamPF008472.6E-91662IPR001471AP2/ERF domain
SMARTSM003803.8E-241681IPR001471AP2/ERF domain
CDDcd000181.28E-141677No hitNo description
PROSITE profilePS5103220.7321675IPR001471AP2/ERF domain
PRINTSPR003671.2E-71728IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-241876IPR001471AP2/ERF domain
PRINTSPR003671.2E-73955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MSRSSAMHGI TSTNNKLKGV RRRKWGKWVS EIRVPGTQER LWLGTYATPE AAAVAHDVAV  60
YCLSRPSSLD KLNFPETLSS YSVQLRDMSP RSVQKVASDV GMDVDARNIV AGKTSTVGAE  120
TNCESDERTS TASVCNVVGE GGADHSDVFW WDDDGGSWHG SGGDSTERDA LSISIEDYL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11723KGVRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN35100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150432e-86AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003538667.21e-129ethylene-responsive transcription factor ERF020
RefseqXP_028189672.11e-129ethylene-responsive transcription factor ERF020-like
TrEMBLA0A0R0HKL01e-128A0A0R0HKL0_SOYBN; Uncharacterized protein
TrEMBLA0A445HVL41e-128A0A445HVL4_GLYSO; Ethylene-responsive transcription factor ERF020
STRINGGLYMA11G01700.11e-129(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.15e-42ERF family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]