PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN35294.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 468aa    MW: 51706.6 Da    PI: 6.365
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN35294.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1315.4e-10181223345
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                 + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  KHN35294.1 181 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 223
                 568899************************9777776666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-8173225No hitNo description
SMARTSM003382.1E-7179242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415181225IPR004827Basic-leucine zipper domain
PfamPF001707.7E-7183223IPR004827Basic-leucine zipper domain
CDDcd147081.12E-21183235No hitNo description
SuperFamilySSF579597.5E-7183226No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141447.6E-33265340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MGSRTTRRVV GVEDDKGAER GMPSSNSELP ISNSCYTEES TIDSFHVSDF GAFDQSYRIG  60
DAVDLSGNPV YNSLKVNSQT ISPGSVHISS LGQLPTSLEK SPLTNQIEPH RLRLQKVQSS  120
NPGTILVGNT DNQEESAMAD ASPRTDISTD GDTDDKNQPY DRNEALAAVS DSSDRSKDKS  180
DQKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRLKLTQLE QELQRARQHG IFISSSGDQA  240
HTLSGNGAMQ FDAEYARWLE EQNRQINELK AAVNSHASDT ELRMIVDGIL AHYDEIFRLK  300
GVAAKADVFH LLSGMWKTPA ERCFLWLGGF RSSELLKLLV SQLEPLTEQQ LMGITNLQQS  360
SQQAEDALSQ GMEALQQSLA ETLSTGAPAS SGSSGNVANY MGQMAMAMGK LGTLEGFIQQ  420
ADNLRQQTLQ QMHRILTTRQ SARALLAIHD YFSRLRALSS LWLARPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN35294.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0963110.0BT096311.1 Soybean clone JCVI-FLGm-25J1 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003546706.10.0transcription factor TGA6 isoform X2
RefseqXP_006598095.10.0transcription factor TGA6 isoform X2
RefseqXP_028203278.10.0transcription factor TGA6-like isoform X2
RefseqXP_028203279.10.0transcription factor TGA6-like isoform X2
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A0B2RSU50.0A0A0B2RSU5_GLYSO; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLK7MDC50.0K7MDC5_SOYBN; Uncharacterized protein
STRINGGLYMA13G26280.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-165TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]