PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN36646.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 50aa    MW: 6069.96 Da    PI: 10.8559
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN36646.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.57.6e-061448440
                HHHHHHHHHHHHHHHHH.HHHHCTSCCC...TTS-.STC CS
         HLH  4 ahnerErrRRdriNsaf.eeLrellPkaskapskK.lsK 40
                  +++Er+RR++++  + ++L ++lP+     ++K  sK
  KHN36646.1 14 ERKIVERNRRNQMKINLhSKLYSILPSY----NPKeWSK 48
                5689*************99********7....3333555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 50 aa     Download sequence    Send to blast
MDQQQRGSQP TKVERKIVER NRRNQMKINL HSKLYSILPS YNPKEWSKDL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN36646.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229428.14e-15transcription factor bHLH162
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2677833
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]