PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN39392.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 284aa    MW: 32383 Da    PI: 4.6704
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN39392.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.8e-10122165245
                 XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                 + +k+ +r  +NR AA rsR+RKk ++++Le k+  Le+e ++L
  KHN39392.1 122 PMSKKLKRQLRNRDAAVRSRERKKLYVKNLEMKSRYLEGECRRL 165
                 5689***********************************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.6E-10118183No hitNo description
SMARTSM003380.006121185IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.255123165IPR004827Basic-leucine zipper domain
PfamPF001702.2E-8124165IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.25E-10125181No hitNo description
CDDcd147046.70E-13126176No hitNo description
PROSITE patternPS000360128143IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MDELEETLLT QIDWESFLDD IPELNVDDFL QDDNAVPVVT DNHSSPNDDP VLSEIENMLM  60
TQAENDAVVL PETPSSEAGY YKLFEEILVE EPKEGPVSPP SKIESEEGSD KDKTDDAASD  120
EPMSKKLKRQ LRNRDAAVRS RERKKLYVKN LEMKSRYLEG ECRRLGHLLQ CCYAENNALR  180
LCLQLRGTYG ASMTMQESAV LLLEPLLLGS LLWCMGIICH LSLPLMLWVA AVLPRENIEQ  240
KGLRRVTQKG SESKISECFQ MQSFLKSRKS RASRTKMKFN FIVF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN39392.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB8235400.0AB823540.1 Glycine max GmbZIP68u mRNA for transcription factor bZIP68 membrane type, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237044.10.0bZIP transcription factor bZIP68
RefseqXP_028208184.10.0bZIP transcription factor 50
TrEMBLA0A0B2S5C70.0A0A0B2S5C7_GLYSO; BZIP transcription factor 50
TrEMBLQ0GPH40.0Q0GPH4_SOYBN; BZIP transcription factor bZIP68
STRINGGLYMA02G19754.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.11e-16basic region/leucine zipper motif 60
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]