PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN39989.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 203aa    MW: 22623.3 Da    PI: 8.31
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN39989.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY41.72.3e-131061561259
                 EE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  12 qKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 qK+ +g  + rsY+rC ++   gC++ k+v+r++e+p++  itY g H+++
  KHN39989.1 106 QKDGRGRYNRRSYFRCGYKydqGCKANKQVQRDQENPNMYRITYIGIHTCN 156
                 89999*************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081112.989103158IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.3E-13106156IPR003657WRKY domain
PfamPF031063.3E-13106155IPR003657WRKY domain
SuperFamilySSF1182905.75E-13106157IPR003657WRKY domain
SMARTSM007745.4E-13106157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MNNIVCFASE ISVSTQKKRV IIEELLKGQE AATQLKVLLL EKPFWSEASL SFQEVMDNVL  60
RSFSEALSIL NSSSSSEPAG SAAEVAHRSL LNSGQPEAAS GEKRFQKDGR GRYNRRSYFR  120
CGYKYDQGCK ANKQVQRDQE NPNMYRITYI GIHTCNATPK ATHSATDSNT WESFLLNSDG  180
EVPNSPSLTI KQQFPKESTS SLI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN39989.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006596397.11e-135probable WRKY transcription factor 70
TrEMBLK7M7W81e-134K7M7W8_SOYBN; Uncharacterized protein
STRINGGLYMA14G36446.11e-134(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-17WRKY DNA-binding protein 70
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]