PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN40442.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 161aa    MW: 18114.3 Da    PI: 8.0121
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN40442.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.96.4e-11113134122
                 ---SS-EEEEEEE--TT-SS-E CS
        WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                 ldDgy+WrKYGqK vk++++p 
  KHN40442.1 113 LDDGYRWRKYGQKAVKNNTYPS 134
                 59*****************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-11100133IPR003657WRKY domain
SuperFamilySSF1182909.81E-9106134IPR003657WRKY domain
PROSITE profilePS5081112.209108133IPR003657WRKY domain
SMARTSM007743.8E-4113161IPR003657WRKY domain
PfamPF031066.0E-7114134IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MESQDPPNPP PQNNPFLFTP NSMLQSPNLD PQEQLGLCDI DWGNLFSAQN SFLLNGDAND  60
AIECASSSSF VAQNKVACEE EKGNKEKRKG GRMKKTTRVP RFAFQTRSAD DILDDGYRWR  120
KYGQKAVKNN TYPSALAVIW IKKYALNYQD AFITVFISQP G
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN40442.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195920.0EU019592.1 Glycine max WRKY64 (WRKY64) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001348337.12e-96WRKY transcription factor 64
RefseqXP_028215578.12e-96probable WRKY transcription factor 43
TrEMBLA7LHJ32e-95A7LHJ3_SOYBN; Transcription factor (Fragment)
STRINGGLYMA18G47350.16e-96(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32273471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.17e-16WRKY DNA-binding protein 24
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]