PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN41758.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family BES1
Protein Properties Length: 664aa    MW: 75156.2 Da    PI: 6.7465
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN41758.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822158.93.4e-49401841141
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq.ssl 98 
                 gg+g+k+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGwvv++DGttyr+ + p+   + +gs+a +s+es+l+  sl
  KHN41758.1  40 GGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVDADGTTYRQ-CPPP---SNVGSFAARSVESQLSgGSL 134
                 689*******************************************************************5.4444...69**************9*** PP

      DUF822  99 kssalaspvesysaspksssfpspssldsislasa.......asllpvls 141
                 ++++++  +e++ a+++ ++ +sp+s+ds+ +a+        ++ +p+ +
  KHN41758.1 135 RNCSVKETIENQTAVLRIDECLSPASIDSVVIAERdsknekyTNARPINT 184
                 ********************************988666555555555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.8E-5041188IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514452.85E-155229661IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.809.0E-170231662IPR013781Glycoside hydrolase, catalytic domain
PfamPF013734.6E-87252628IPR001554Glycoside hydrolase, family 14
PRINTSPR007508.4E-58269283IPR001554Glycoside hydrolase, family 14
PRINTSPR007508.4E-58290308IPR001554Glycoside hydrolase, family 14
PRINTSPR007508.4E-58312333IPR001554Glycoside hydrolase, family 14
PRINTSPR007508.4E-58405427IPR001554Glycoside hydrolase, family 14
PRINTSPR007508.4E-58478497IPR001554Glycoside hydrolase, family 14
PRINTSPR007508.4E-58512528IPR001554Glycoside hydrolase, family 14
PRINTSPR007508.4E-58529540IPR001554Glycoside hydrolase, family 14
PRINTSPR007508.4E-58547570IPR001554Glycoside hydrolase, family 14
PRINTSPR007508.4E-58585607IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 664 aa     Download sequence    Send to blast
MALSLVVRNT VSVKCTKREE APPSTRPRGF AAAPVTTNTG GKGKKEREKE KERTKLRERH  60
RRAITSRMLA GLRQYGNFPL PARADMNDVL AALAREAGWV VDADGTTYRQ CPPPSNVGSF  120
AARSVESQLS GGSLRNCSVK ETIENQTAVL RIDECLSPAS IDSVVIAERD SKNEKYTNAR  180
PINTVDCLEA DQFLNVFVLV SAKLDSFGIQ PKSFSLMQDI HSGVHENDFT STPYVSVYVK  240
LPAGIINKFC QLIDPEGIKQ ELIHIKSLNV DGVVVDCWWG IVEGWSSQKY VWSGYRELFN  300
IIREFKLKLQ VVMAFHECGG NDSSDALISL PQWVLDIGKD NQDIFFTDRE GRRNTECLSW  360
GIDKERVLKG RTGIEVYFDM MRSFRTEFDD LFAEGLISAV EVGLGASGEL KYPSFSERMG  420
WRYPGIGEFQ CYDKYLQNSL RRAAKLHGHS FWARGPDNAG HYNSMPHETG FFCERGDYDN  480
YYGRFFLHWY SQTLIDHADN VLSLATLAFE ETKIIVKVPA VYWWYKTPSH AAELTAGYHN  540
PTYQDGYSPV FEVLRKHAVT MKFVCLGFHL SSQEAYEPLI DPEGLSWQVL NSAWDRGLMA  600
AGENALLCYG REGYKRLVEM AKPRNDPDCR HFSFFVYQQP SLLQANVCLS ELDFFVKCMH  660
GKDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdq_A1e-12523462411401Beta-amylase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00543DAPTransfer from AT5G45300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN41758.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003516502.10.0beta-amylase 8
RefseqXP_028239751.10.0beta-amylase 8-like
SwissprotQ9FH800.0BAM8_ARATH; Beta-amylase 8
TrEMBLA0A445M3900.0A0A445M390_GLYSO; Beta-amylase
TrEMBLK7K4000.0K7K400_SOYBN; Beta-amylase
STRINGGLYMA01G35500.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF119023032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.10.0beta-amylase 2
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]
  2. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]