PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN42146.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 318aa    MW: 35046.1 Da    PI: 6.8982
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN42146.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.96.8e-16248292549
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                 +r++r++kNRe+A rsR+RK+a+++eLe kv +Le+eN++L+ ++
  KHN42146.1 248 RRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERLRRQN 292
                 79****************************************765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-14241293No hitNo description
SMARTSM003383.0E-14244316IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.679246291IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-11248294No hitNo description
CDDcd147071.10E-24248293No hitNo description
PfamPF001703.8E-13248293IPR004827Basic-leucine zipper domain
PROSITE patternPS000360251266IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MGSQSGATQD QEPKTGSLTR QGSLYNLTLD EVQNQLGNLG KPVGSMNLDE LLKSVWTVES  60
GTDAYMHHGG GQVVSAGSSL NPEQGSLTLS GDLSKKTIDE VWRDMQQNKS VGKERQPTLG  120
EMTLEDFLVK AGVSTEPFPN EDGAMAMSGV DSQHNTLQHA HWMQYQLTSV QQQQQPQQQN  180
SVMPGFSGFM AGHVVQQPKY SSVQDCILFI LPSSEALPSS LMAALSDSQT AGRKRVASGN  240
VVEKTVERRQ KRMIKNRESA ARSRARKQAY TQELEIKVSQ LEEENERLRR QNEIERALPS  300
APSPDPKHQL RRTSSAPL
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN42146.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150371e-138AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003520322.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_028223942.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES31e-104AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A445L5T40.0A0A445L5T4_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLI1JK140.0I1JK14_SOYBN; Uncharacterized protein
STRINGGLYMA03G00580.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.19e-90ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  3. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]