PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN42756.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ARR-B
Protein Properties Length: 208aa    MW: 23957.8 Da    PI: 6.6223
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN42756.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like23.61.2e-071792042651
     G2-like  26 kAtPktilelmkvkgLtlehvkSHLQ 51 
                 +A Pk+i+e+m+++ L +e+v+SHLQ
  KHN42756.1 179 EAKPKRIVEAMNIPALIREQVASHLQ 204
                 599*********************** PP
2Response_reg48.45e-17191241106
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vd + ++++++++++ + +y ++ + +d++ al++++ek+  +D+il+ + mp  d +e+l++ + e  ++p+i+++  ++++++ +a+  Ga 
    KHN42756.1  19 VLAVDHDTTILDVIKKMCFRCHY-RAVTYSDASLALNYVREKKdcIDVILIEVHMPYGDSYEFLQHVTVET-NIPVIMMSLDDAKSTVMKAIIDGAC 113
                   799********************.***************99999***********************9988.9************************ PP

                   EEEESS--HHH CS
  Response_reg  96 dflsKpfdpee 106
                   d+  Kp ++++
    KHN42756.1 114 DYRIKPLHENQ 124
                   ******98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.7E-2516147No hitNo description
SuperFamilySSF521726.4E-2316144IPR011006CheY-like superfamily
SMARTSM004482.1E-1217129IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011029.21918133IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.4E-1219125IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.94E-1320133No hitNo description
TIGRFAMsTIGR015571.3E-7179208IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.606.2E-6179204IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0005622Cellular Componentintracellular
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MGTYPTEKVF FQFPAGLRVL AVDHDTTILD VIKKMCFRCH YRAVTYSDAS LALNYVREKK  60
DCIDVILIEV HMPYGDSYEF LQHVTVETNI PVIMMSLDDA KSTVMKAIID GACDYRIKPL  120
HENQFKIMWK HVARKLWSKN QLPKKEDSEY VASYVLDSTV MDPEKIGSNF KDSDSYEPEA  180
KPKRIVEAMN IPALIREQVA SHLQVCFL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN42756.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006580820.11e-131two-component response regulator ORR21
RefseqXP_028230825.11e-131two-component response regulator ORR21-like
TrEMBLA0A0B2S7V51e-154A0A0B2S7V5_GLYSO; Two-component response regulator ARR14
STRINGGLYMA19G06751.12e-67(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14524517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.16e-41response regulator 14
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]