PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN43938.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family SAP
Protein Properties Length: 146aa    MW: 15253.2 Da    PI: 5.6141
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN43938.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP80.91.7e-256101282
         SAP   2 ssssssssseseegseggeggdass..............gesegp.sssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcst 82 
                 sssssssss+s++++++++++da +              g++e++ ss+rqra+nev+peP+lealatq+a+da++++Grl+aasala++fqv++ 
  KHN43938.1   6 SSSSSSSSSSSSSSTSSSTPYDAVApdipgpstrrtggtGQFEASsSSQRQRAMNEVLPEPLLEALATQLALDAASYNGRLSAASALAILFQVATF 101
                 34444444555555566677777779*************8888761578999*****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MSSTSSSSSS SSSSSSSSST SSSTPYDAVA PDIPGPSTRR TGGTGQFEAS SSSQRQRAMN  60
EVLPEPLLEA LATQLALDAA SYNGRLSAAS ALAILFQVAT FLSSSSLYIS PLISLPHLTI  120
LLAVRVVNED KFFFMIAHIG WLCLPC
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN43938.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028222276.15e-42transcriptional regulator STERILE APETALA-like
TrEMBLA0A0B2SGI73e-97A0A0B2SGI7_GLYSO; Uncharacterized protein
STRINGGLYMA02G47470.17e-41(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]