PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN43939.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family SAP
Protein Properties Length: 141aa    MW: 15712.9 Da    PI: 8.4782
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN43939.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP167.31.1e-511139324455
         SAP 324 lvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyagg.....vlrvWeiekkeg 416
                 +v+f++rn++v+lr++ +++G++vssldas+eayvv++++Gv+tvrr++++e+++rfr+++ + rg+++C+n+gy+l+y+++      lrvW+ie+++g
  KHN43939.1   1 MVCFSFRNPEVLLRDVGSTMGFVVSSLDASQEAYVVLERNGVGTVRRASTYERLSRFRLNRlWVRGLWACMNLGYVLTYSPApspspSLRVWDIEQAIG 99 
                 69******************************************************************************99999999*********99 PP

         SAP 417 .ylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455
                  ++++l +r+g+vn+lva+drhv++ss+d++i+lldfg+q
  KHN43939.1 100 rLCVTLGVRAGYVNSLVANDRHVSISSNDNNINLLDFGVQ 139
                 9*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MVCFSFRNPE VLLRDVGSTM GFVVSSLDAS QEAYVVLERN GVGTVRRAST YERLSRFRLN  60
RLWVRGLWAC MNLGYVLTYS PAPSPSPSLR VWDIEQAIGR LCVTLGVRAG YVNSLVANDR  120
HVSISSNDNN INLLDFGVQD P
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN43939.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003518569.12e-95transcriptional regulator STERILE APETALA
RefseqXP_028222276.12e-95transcriptional regulator STERILE APETALA-like
TrEMBLA0A0B2SI561e-97A0A0B2SI56_GLYSO; Transcriptional regulator STERILE APETALA
TrEMBLA0A445LWD44e-94A0A445LWD4_GLYSO; Transcriptional regulator STERILE APETALA
TrEMBLI1JJP35e-94I1JJP3_SOYBN; Uncharacterized protein
STRINGGLYMA02G47470.18e-95(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.12e-12SAP family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]