PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN44243.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Dof
Protein Properties Length: 223aa    MW: 24591.8 Da    PI: 3.7978
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN44243.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof44.63e-142146631
      zf-Dof  6 lkcprCdstntkfCyynnyslsqPry 31
                 +cprC stntkfCyynnyslsqP +
  KHN44243.1 21 PNCPRCASTNTKFCYYNNYSLSQPSH 46
                68**********************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074786.0E-101246IPR003851Zinc finger, Dof-type
PfamPF027019.8E-122147IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MVTPMEEQQR SRWKPSVEVA PNCPRCASTN TKFCYYNNYS LSQPSHQRAF SCENTESSSV  60
GDYAQQNNNV SRDIDMALVF AKFLNPKPTT GEDNNGSPSS NNYLTPESVE IENDAVVQSQ  120
NKASSDPVIV ESENLSLVEI DELERLLGVC GDEDGLWSDA TLSSSVTWEP PLKESEYSMP  180
LNEDDGDQLL PIIISASTMS DTCWSNWSSF DLSTMDALSS SPS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN44243.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ8572742e-65DQ857274.1 Glycine max Dof23 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003522553.11e-151dof zinc finger protein DOF3.5
RefseqXP_028227101.11e-151dof zinc finger protein DOF3.5-like
TrEMBLA0A0B2SHE91e-161A0A0B2SHE9_GLYSO; Dof zinc finger protein DOF3.5
STRINGGLYMA04G41830.21e-151(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18173394
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-15Dof family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]