PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN44812.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 107aa    MW: 12493.6 Da    PI: 10.4743
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN44812.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.8e-055893832
                HHHHHHHHHHHHHHHHHCTSCCC............. CS
         HLH  8 rErrRRdriNsafeeLrellPkas...........k 32
                + r+RR++i ++ +eL  l+P  +           +
  KHN44812.1 58 VARQRRRKITKKTQELENLVPGEPkmnttemlhfvA 93
                569******************963244444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.9E-64996IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.8E-65398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MSRTPKVLLR GKTCVLFTTR EELQQQLFYE IPQNGDNYVD LDWKKKGNER TISPQSLVAR  60
QRRRKITKKT QELENLVPGE PKMNTTEMLH FVATKYVKLP KLGCLNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14364KKKGNERTISPQSLVARQRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN44812.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006598645.17e-27transcription factor bHLH52
RefseqXP_028202025.17e-27transcription factor bHLH52-like
TrEMBLA0A0B2SKL62e-73A0A0B2SKL6_GLYSO; Transcription factor bHLH52
STRINGGLYMA15G41400.23e-26(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]