PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN45285.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 303aa    MW: 34212.9 Da    PI: 8.0336
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN45285.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41e-12100151155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r +h  +Er+RR+++N+ +  Lr+l+P++   + ++ + a+i+  A+e++k+L+
  KHN45285.1 100 QRITHITVERNRRKQMNEHLVVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 151
                 799***************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.66E-1298155No hitNo description
SuperFamilySSF474596.41E-1698167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-1298154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.32299150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-10100151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-9105156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0055114Biological Processoxidation-reduction process
GO:0032440Molecular Function2-alkenal reductase [NAD(P)] activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MALETLASNE FSNFIIYDTI SATPFSSHGS PEASFLESLV NYQEHDPAFD NSALRTRNHQ  60
AGEQESVGRR QNVVGVQVQG RKKRRRKPRV CKNKEEAETQ RITHITVERN RRKQMNEHLV  120
VLRSLMPESY VQRGDQASIV GGAIEFVKEL EHLLQSLEAR KLQLLHQEVV QANENTAISK  180
LMQPPFAQFF SYPQYTWSQT PNKYTSKTKA AIADIEVTLI ETHANLRILT RRNSPGQLTK  240
LVAGFQTLCL TVLHLNVTTI DPLVFYSISA KVEEGFQLCS VDGIATAIHH LLARIEEEAS  300
LCS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18086RKKRRRK
28087RKKRRRKP
38186KKRRRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN45285.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0943130.0BT094313.1 Soybean clone JCVI-FLGm-24B24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028234574.10.0transcription factor bHLH71-like
SwissprotQ56XR04e-69BH071_ARATH; Transcription factor bHLH71
TrEMBLA0A0B2SJV00.0A0A0B2SJV0_GLYSO; Transcription factor bHLH71
TrEMBLI1KDQ10.0I1KDQ1_SOYBN; Uncharacterized protein
STRINGGLYMA06G35330.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106443138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-71bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]