PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN45461.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family HB-other
Protein Properties Length: 67aa    MW: 8074.37 Da    PI: 11.6503
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN45461.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox17.57.1e-06562154
                TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC...TS-HHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl...gLterqVkvWFqNrRak 54
                r+kRttf++eq + L ++ e+   +p +e++ e+ + +   g+t r   vW  N R +
  KHN45461.1  5 RKKRTTFSSEQKNKLIRFAESvGWKPRKEKKDEIESFCsemGITRRMFVVWLSNNRHR 62
                89*************99888677788877777776665555**************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.155266IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.0E-21263IPR009057Homeodomain-like
SuperFamilySSF466893.43E-15262IPR009057Homeodomain-like
TIGRFAMsTIGR015652.6E-20460IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    Send to blast
MRSKRKKRTT FSSEQKNKLI RFAESVGWKP RKEKKDEIES FCSEMGITRR MFVVWLSNNR  60
HRAINNA
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN45461.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006593246.13e-42zinc-finger homeodomain protein 5
RefseqXP_028193349.13e-42zinc-finger homeodomain protein 5-like
TrEMBLA0A445HRE07e-41A0A445HRE0_GLYSO; Zinc-finger homeodomain protein 2
TrEMBLK7LVE27e-41K7LVE2_SOYBN; Uncharacterized protein
STRINGGLYMA12G29010.21e-41(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15282511
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.13e-15homeobox protein 33