PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN45875.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 149aa    MW: 16878.8 Da    PI: 9.2128
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN45875.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.74.5e-123189563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                ++ +rkq+NRe+ArrsR RK+  +++L++   +L + N +   +++  ++++ ++++e+
  KHN45875.1 31 RKNKRKQSNRESARRSRMRKRNHLDQLTKQLSQLAKNNGEILATIDITTQHYLNVEAEN 89
                689******************************************99999999888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-152791IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-928106No hitNo description
PROSITE profilePS5021710.222992IPR004827Basic-leucine zipper domain
PfamPF001706.7E-93182IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-103184No hitNo description
CDDcd147021.74E-133282No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000165Biological ProcessMAPK cascade
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005622Cellular Componentintracellular
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004707Molecular FunctionMAP kinase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MASSSGNSSI STKSQSSGSE GDLQVVITDE RKNKRKQSNR ESARRSRMRK RNHLDQLTKQ  60
LSQLAKNNGE ILATIDITTQ HYLNVEAENS ILRAQMGELS QRLQSLNDIV HDIIINTTTT  120
YERDCYLTSA QNFTTTTNTL CLNQPVFQW
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN45875.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311030.0KT031103.1 Glycine max clone HN_CCL_15 bHLH transcription factor (Glyma04g03200.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028227538.11e-106bZIP transcription factor 44-like
SwissprotC0Z2L53e-38BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A445KVS71e-105A0A445KVS7_GLYSO; BZIP transcription factor 44
STRINGGLYMA04G03200.11e-104(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2014845
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-23basic leucine-zipper 44
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]