PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN45879.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family TALE
Protein Properties Length: 332aa    MW: 37519.2 Da    PI: 6.3194
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN45879.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.75.5e-102552921954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yp+ +e+  LA+++gLt++qV++WF N R +
  KHN45879.1 255 FEHflHPYPNDSEKLMLASQTGLTKNQVSNWFINARVR 292
                 564459******************************88 PP
2BELL103.51.5e-33118188272
        BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 ++e+q+k+a+L++ll+eV+ r ++y++q++ v+ssFe++aglg+ak Yt+lAl+a+SrhF +L+dai +qi
  KHN45879.1 118 KHEHQIKIARLITLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAILSQI 188
                 79*******************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.6E-3148186IPR006563POX domain
PfamPF075263.6E-4053184IPR006563POX domain
CDDcd000862.10E-11236297No hitNo description
SMARTSM003891.1E-9236300IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.2E-27241302IPR009057Homeodomain-like
SuperFamilySSF466897.27E-18242303IPR009057Homeodomain-like
PfamPF059203.3E-17253292IPR008422Homeobox KN domain
PROSITE profilePS5007111.888255296IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MSGQEAREPC NNPPVEQHNI TSDYFYNTGS GTFASSSPLN NRSPNSTSSY AAVIGNSRYL  60
KPVQSLLEDL VDVGGNVVDR INEKYAEKLF RGSRGSARTL SSELKAELGN NGHLLADKHE  120
HQIKIARLIT LLDEVEGRCE KYYHQMEEVV SSFEMIAGLG AAKCYTALAL QAMSRHFCSL  180
RDAILSQINA EKRKLFQDLP KISSGLSQLS LFDRDSRQSR MSLQQLGVIP SQRQVWRPIR  240
GLPETSVAIL RSWLFEHFLH PYPNDSEKLM LASQTGLTKN QVSNWFINAR VRLWKPMIEE  300
MYKEEFGEFS EDSNPAGNNY LTREDTTDCV ED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A7e-17242300563Homeobox protein Meis2
4xrm_B7e-17242300563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN45879.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028227528.10.0BEL1-like homeodomain protein 11 isoform X1
RefseqXP_028227529.10.0BEL1-like homeodomain protein 11 isoform X1
RefseqXP_028227530.10.0BEL1-like homeodomain protein 11 isoform X2
SwissprotQ1PFD11e-106BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLA0A445KUR00.0A0A445KUR0_GLYSO; BEL1-like homeodomain protein 11 isoform C
TrEMBLA0A445KUU40.0A0A445KUU4_GLYSO; BEL1-like homeodomain protein 11 isoform A
STRINGGLYMA04G03160.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126452329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-107BEL1-like homeodomain 11
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]