PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN46677.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 75aa    MW: 8786.66 Da    PI: 10.4832
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN46677.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.8e-054462119
                CHHHHHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsa 19
                +r +h+e E+rRR++iN++
  KHN46677.1 44 QRSKHSETEQRRRSKINER 62
                799**************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.108.9E-44362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
MARSAKGHQD EFDDDDEEEL LTANNTSSKV KVDEPSTGKR VNPQRSKHSE TEQRRRSKIN  60
ERQALKKRRR KNSFC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15370RRRSKINERQALKKRRRK
26471LKKRRRKN
36570KKRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKHN46677.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0970882e-99BT097088.1 Soybean clone JCVI-FLGm-21H13 unknown mRNA.
GenBankKT0311272e-99KT031127.1 Glycine max clone HN_CCL_217 bHLH transcription factor (Glyma18g51080.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001240051.15e-36transcription factor BIM2-like
RefseqXP_028211977.15e-36transcription factor BIM2-like
TrEMBLA0A0B2SR007e-47A0A0B2SR00_GLYSO; Uncharacterized protein
STRINGGLYMA18G51080.12e-35(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G38860.12e-06BES1-interacting Myc-like protein 3
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]