PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538699.1_FGP086
Organism
Oryza longistaminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 92aa    MW: 10636.3 Da    PI: 10.7964
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538699.1_FGP086genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.88.3e-121476163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                       eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kke +   +e+ +lk  +
  KN538699.1_FGP086 14 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNETMKKEKDVVMQEYLSLKETN 76
                       89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-121478IPR004827Basic-leucine zipper domain
PfamPF001701.3E-91477IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.9791679IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.11E-81874No hitNo description
Gene3DG3DSA:1.20.5.1703.6E-61885No hitNo description
CDDcd147023.68E-81969No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MASTRLSLEL GKAEKEAKRL RRVLANRESA RQTILRRQAI RDELARKVAD LSSQNETMKK  60
EKDVVMQEYL SLKETNKQLK EQAQSHLSLS LI
Cis-element ? help Back to Top
SourceLink
PlantRegMapKN538699.1_FGP086
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2879051e-113AK287905.1 Oryza sativa Japonica Group cDNA, clone: J065211O07, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006663222.21e-44PREDICTED: light-inducible protein CPRF2-like, partial
TrEMBLA0A0E0BFG93e-47A0A0E0BFG9_9ORYZ; Uncharacterized protein
STRINGOGLUM12G04120.15e-42(Oryza glumipatula)
STRINGORUFI12G03900.15e-42(Oryza rufipogon)
STRINGONIVA12G03070.16e-42(Oryza nivara)
STRINGOBART12G03450.12e-42(Oryza barthii)
STRINGLPERR11G02970.16e-42(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.14e-18bZIP family protein