PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538763.1_FGP014
Organism
Oryza longistaminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 84aa    MW: 10009.5 Da    PI: 10.3984
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538763.1_FGP014genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.35.8e-12668163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                       eke kr rr   NRe+Ar   +R++a  +eL++kv+ L+++N+++kke e+  +e+ +lk  +
  KN538763.1_FGP014  6 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSTQNESMKKERETVMQEYLSLKETN 68
                       89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-12670IPR004827Basic-leucine zipper domain
PfamPF001705.6E-11669IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.14871IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-61066No hitNo description
SuperFamilySSF579592.09E-81066No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
MLTEEEKEAK RLRRVLANRE SARQTILRRQ AIRDELARKV ADLSTQNESM KKERETVMQE  60
YLSLKETNKQ LKEQAQHHLS LSLF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKN538763.1_FGP014
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankOSU042971e-138U04297.1 Oryza sativa Nipponbare bZIP DNA-binding factor (osZIP-2b) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006663833.14e-49PREDICTED: G-box-binding factor 1-like
TrEMBLA0A0D3HRM22e-51A0A0D3HRM2_9ORYZ; Uncharacterized protein
TrEMBLA0A0E0BP783e-51A0A0E0BP78_9ORYZ; Uncharacterized protein
TrEMBLA0A0E0MJT92e-51A0A0E0MJT9_ORYPU; Uncharacterized protein
TrEMBLA0A0E0RE032e-51A0A0E0RE03_ORYRU; Uncharacterized protein
TrEMBLA3CF391e-51A3CF39_ORYSJ; Uncharacterized protein
TrEMBLB8BN972e-51B8BN97_ORYSI; Uncharacterized protein
STRINGOGLUM12G04120.14e-52(Oryza glumipatula)
STRINGORUFI12G03900.14e-52(Oryza rufipogon)
STRINGOPUNC12G03250.14e-52(Oryza punctata)
STRINGOBART12G03450.13e-52(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.11e-16bZIP family protein