PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KN538770.1_FGP047

Organism

Oryza longistaminata

Taxonomic ID

4528

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

VOZ

Protein Properties

Length: 636aa MW: 70035.7 Da PI: 5.7345

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KN538770.1_FGP047	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	420.2	3.5e-129	303	520	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwn 91 p+ps++lgpkcalwdc rp++gs+++q+yc+ +ha laln+ gl+gt+pv+rp+gidlkdg+lfaalsakvqgk+vgip+cegaat+kspwn KN538770.1_FGP047 303 PSPSQYLGPKCALWDCGRPVRGSDECQHYCNPYHAGLALNDdGLLGTRPVMRPRGIDLKDGPLFAALSAKVQGKNVGIPVCEGAATTKSPWN 394 89************************************9799******************************************** PP VOZ 92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalaly 183 a+elfdlsllege++rewlffd+prraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpss++ewhl+eye+n++dalaly KN538770.1_FGP047 395 APELFDLSLLEGESLREWLFFDTPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSNYEWHLFEYETNDSDALALY 486 **************************************************************************************** PP VOZ 184 rlelklvdekksakgkvskdsladlqkklgrlta 217 rle+k++d+k+s+k+k+++++l+++q++++rl+a KN538770.1_FGP047 487 RLEYKSSDTKRSVKSKLASSPLSEIQQQMVRLSA 520 ******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence Send to blast
MFSGLQSARK ESRSADAALL EEQNSQSQGN NREASDPPSE TLRLLQLAGA EEEEDDATSK 60 LVMPRSPMPM QSSHEGHNLS PVLQGGAAEL MVPRSPLQQM PSSHQSHGHG QDGGQNLQGE 120 AVMGSIAATA APHLGQGMQG DCGGMAGVTN AMFHDQAWAF SQAGHTFLLH TAFFCNCQLF 180 LSIPQKKLIA ILYVSFLRST SPQRFHGSMV NHANCESHNV LLYYIDHELN IDDFLQDDDY 240 KINLPGSNPD GPNTMQGIGQ LEHQQYNLPL DLPPNSFVDA NNSAQSSGDV FFHMSDLLTT 300 MCPSPSQYLG PKCALWDCGR PVRGSDECQH YCNPYHAGLA LNDDGLLGTR PVMRPRGIDL 360 KDGPLFAALS AKVQGKNVGI PVCEGAATTK SPWNAPELFD LSLLEGESLR EWLFFDTPRR 420 AFDSGNRKQR SLPDYNGRGW HESRKQVMKD FGGLKRSYYM DPQPSSNYEW HLFEYETNDS 480 DALALYRLEY KSSDTKRSVK SKLASSPLSE IQQQMVRLSA DSPVESKRTA RSRAKANQKD 540 NNSNAYPALN TPVQVSASNA HQTMSVNTPD QVNVSNAYQT MPLNTPNQPG PSNAYHAASQ 600 MDQMTFLDGS VVYGPHLPYG YSTERSDFYW NPSDGT

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence Send to blast

MFSGLQSARK ESRSADAALL EEQNSQSQGN NREASDPPSE TLRLLQLAGA EEEEDDATSK  60
LVMPRSPMPM QSSHEGHNLS PVLQGGAAEL MVPRSPLQQM PSSHQSHGHG QDGGQNLQGE  120
AVMGSIAATA APHLGQGMQG DCGGMAGVTN AMFHDQAWAF SQAGHTFLLH TAFFCNCQLF  180
LSIPQKKLIA ILYVSFLRST SPQRFHGSMV NHANCESHNV LLYYIDHELN IDDFLQDDDY  240
KINLPGSNPD GPNTMQGIGQ LEHQQYNLPL DLPPNSFVDA NNSAQSSGDV FFHMSDLLTT  300
MCPSPSQYLG PKCALWDCGR PVRGSDECQH YCNPYHAGLA LNDDGLLGTR PVMRPRGIDL  360
KDGPLFAALS AKVQGKNVGI PVCEGAATTK SPWNAPELFD LSLLEGESLR EWLFFDTPRR  420
AFDSGNRKQR SLPDYNGRGW HESRKQVMKD FGGLKRSYYM DPQPSSNYEW HLFEYETNDS  480
DALALYRLEY KSSDTKRSVK SKLASSPLSE IQQQMVRLSA DSPVESKRTA RSRAKANQKD  540
NNSNAYPALN TPVQVSASNA HQTMSVNTPD QVNVSNAYQT MPLNTPNQPG PSNAYHAASQ  600
MDQMTFLDGS VVYGPHLPYG YSTERSDFYW NPSDGT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KN538770.1_FGP047

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK069076	0.0	AK069076.1 Oryza sativa Japonica Group cDNA clone:J023004H20, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015640409.1	0.0	transcription factor VOZ1
TrEMBL	B9FL48	0.0	B9FL48_ORYSJ; Uncharacterized protein
STRING	OGLUM05G24010.1	0.0	(Oryza glumipatula)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-111	vascular plant one zinc finger protein