PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KN538969.1_FGP008
Organism
Oryza longistaminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 132aa    MW: 13967.2 Da    PI: 10.1654
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KN538969.1_FGP008genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.43.2e-0851951862
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                       r  R+RKka++ eLe k+k Le  N +L +++++l++e  +l++ 
  KN538969.1_FGP008 51 RQARERKKAYMTELEAKAKDLELRNAELEQRVSTLQNENNTLRQI 95
                       567*************************************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.2E-44498IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.8874499IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.8E-115298No hitNo description
SuperFamilySSF579591.63E-75296No hitNo description
PfamPF077162.0E-65388IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MAAQEQEQEK QQAKTSTTSS LPSSSERSSS SAPNNLKEGG GGVESDEEIR RQARERKKAY  60
MTELEAKAKD LELRNAELEQ RVSTLQNENN TLRQILKNTT AHAGKRGGGG GGGGGKGGDG  120
GGGGKKHHFT KS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113121GGKGGDGGG
2115124KGGDGGGGGK
Cis-element ? help Back to Top
SourceLink
PlantRegMapKN538969.1_FGP008
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3656486e-67AK365648.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2035O05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004968380.12e-30transcription factor HY5
TrEMBLA0A287KG379e-38A0A287KG37_HORVV; Uncharacterized protein
STRINGOPUNC01G04590.17e-32(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.12e-18bZIP family protein