PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information? help Back to Top

TF ID

KXZ41543.1

Organism

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

Protein Properties

Length: 234aa MW: 22866.1 Da PI: 9.8605

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ41543.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	53.7	4.2e-17	157	205	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++ + l+ +lpik++A+e gv+l+ K++CR +G +RWP+Rk++sl KXZ41543.1 157 TLTKQALRPRLHLPIKEVASEFGVSLSFFKKQCRALGFRRWPSRKLSSL 205 688999****************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	15.789	137	225	IPR003035	RWP-RK domain
Pfam	PF02042	1.9E-15	157	205	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence Send to blast
MGCGGGEGEA GGGLANRGGG GGTGVQQDWE MGCGDAEDEA DGGVAADSSR LGLGANDAST 60 SAPAVALPPP PPPPAAGRKT SRRPKAAAPD NSDGGDVDAN WASDGDSGDD GGSNGSTAAA 120 AAAPAATAAR KRGSAASKAA DGGAGGAPRG ARRPQLTLTK QALRPRLHLP IKEVASEFGV 180 SLSFFKKQCR ALGFRRWPSR KLSSLARVRK ALEGDGGGGG GEAAQKALGS ARVN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A150FV96	1e-157	A0A150FV96_GONPE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP6094	2	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	4e-10	RWP-RK domain-containing protein