PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ41653.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family bHLH
Protein Properties Length: 248aa    MW: 26093.4 Da    PI: 9.7839
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ41653.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.2e-13754454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++  rE+ RR+++N++f+ L +l+ ++   + +K +K++iL+ A++Y++++
  KXZ41653.1  7 KKACREKARREKLNERFADLARLIDPN---GEPKTDKSTILTDAIKYVQQM 54
                5678***********************...*******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.618354IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.9E-14673IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.10E-10659No hitNo description
PfamPF000103.2E-11754IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-14876IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-11960IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MSAAATKKAC REKARREKLN ERFADLARLI DPNGEPKTDK STILTDAIKY VQQMTVENHQ  60
LRQLNKFLEE RVSTLERERG QQLYQQSLMM TQMGGGQLMQ AGQAMMVGGP AGMMGGAMQG  120
PAMAHPVAMQ ASAAMASSSG ALMSAAPLPA APTPPLPTLH SQPHQQQTVA AGMVTPAQGG  180
MMMQMPGAVS GMGTAGLGVT VNVAAGAGPS KPIMVNAMPG AMPYQGMYWL PPQMMDSTQD  240
SLLRPPAA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00372DAPTransfer from AT3G23210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011396941.18e-33Transcription factor
TrEMBLA0A150FVK41e-176A0A150FVK4_GONPE; Uncharacterized protein
STRINGA0A087SEA63e-32(Auxenochlorella protothecoides)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP564977
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23210.12e-11bHLH family protein