PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ41745.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family Nin-like
Protein Properties Length: 153aa    MW: 17315.3 Da    PI: 6.5247
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ41745.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK55.98.5e-18243849
      RWP-RK  8 edlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                e l+++++ pik++AkeLg++l+  K+ CR++G++RWP Rk+
  KXZ41745.1  2 ESLRQHYHRPIKAVAKELGLSLSCFKKECRRLGVPRWPARKL 43
                789**************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF020422.5E-16143IPR003035RWP-RK domain
PROSITE profilePS5151916.324166IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MESLRQHYHR PIKAVAKELG LSLSCFKKEC RRLGVPRWPA RKLGCLARMR DTLMRDGRAS  60
QKSKQELLEL MQRNMDEIVN DPNAPMYDTF TRVRHEQYKA RGDGRAGGRA RRHAAGRGGA  120
DDDVEEEDSD EEVEDEEDGE VGEMDKGNGA GGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100109RGDGRAGGRA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_001698973.11e-30RWP-RK transcription factor
TrEMBLA0A150FX081e-107A0A150FX08_GONPE; Uncharacterized protein
STRINGEDO990275e-30(Chlamydomonas reinhardtii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP609428
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.18e-14RWP-RK domain-containing protein