PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ44281.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family NF-YC
Protein Properties Length: 213aa    MW: 22726.1 Da    PI: 8.9751
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ44281.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC25.92e-08921571984
       NF-YC  19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavt 84 
                 ++lP + +++++  d +v++ + ea + ls a ++f+  +  ++   a  +krrt++  d++ +v 
  KXZ44281.1  92 TTLPASWVRRVVSLDHEVNRCTGEALMALSAAADVFLTAVCAKATAAAAGAKRRTVRLDDVDRCVR 157
                 579**********************************************************99885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011813.494173IPR009071High mobility group box domain
Gene3DG3DSA:1.10.30.101.3E-16270IPR009071High mobility group box domain
SMARTSM003982.5E-9274IPR009071High mobility group box domain
CDDcd013904.17E-16368No hitNo description
SuperFamilySSF470952.23E-16371IPR009071High mobility group box domain
PfamPF005052.2E-12371IPR009071High mobility group box domain
SuperFamilySSF471131.62E-1191157IPR009072Histone-fold
Gene3DG3DSA:1.10.20.104.7E-1191157IPR009072Histone-fold
PfamPF008081.7E-693156IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MAPPSAYMLF CNENREAARQ KLASEGHEKM PVTMVAKELG QMWKALNDED RAKFRARAEE  60
LLKQWKQEHP EQPGEQDAEG GAAAPAGAQL PTTLPASWVR RVVSLDHEVN RCTGEALMAL  120
SAAADVFLTA VCAKATAAAA GAKRRTVRLD DVDRCVRGDK RLVAVGLTAV LSMVSASASA  180
AEDLKAAAPP GKKPKLDKPE VAANNIKRAF GLA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002957240.14e-66hypothetical protein VOLCADRAFT_98278
TrEMBLA0A150G3B11e-151A0A150G3B1_GONPE; Uncharacterized protein
STRINGXP_002957240.12e-65(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP46741111