PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ44968.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family ERF
Protein Properties Length: 98aa    MW: 11051.3 Da    PI: 8.9362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ44968.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.96.9e-154898156
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                s y+GV+w+k+r +W+ ++r+       k+ + g+f+t  eAa a++aa++k +g+
  KXZ44968.1 48 SSYRGVSWNKNRSKWETQLREL-----GKNLYFGRFDTQLEAALAYDAAARKHHGA 98
                67****************9993.....4************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.3E-94895IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-114897IPR016177DNA-binding domain
PROSITE profilePS5103212.5764998IPR001471AP2/ERF domain
SMARTSM003800.00234998IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-104997IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MLYKRDGEAA VFNFGLSDAQ RAELDAMSME DLLASFRSHG ERFASGASSY RGVSWNKNRS  60
KWETQLRELG KNLYFGRFDT QLEAALAYDA AARKHHGA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002949573.11e-18hypothetical protein VOLCADRAFT_89954
TrEMBLA0A150G5632e-64A0A150G563_GONPE; Uncharacterized protein
STRINGXP_002949573.14e-18(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1050944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.16e-09AP2 family protein