PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KXZ45735.1

Organism

Gonium pectorale

Taxonomic ID

33097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

MYB_related

Protein Properties

Length: 712aa MW: 75610.2 Da PI: 8.9728

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ45735.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29	2.5e-09	7	36	16	47
HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqky 47 + q+G++ W++Ia++++ gRt++++k+ w++ KXZ45735.1 7 HSQFGNR-WSAIAKYLP-GRTDNDLKNLWHST 36 689**.*****.*******99975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	14.271	1	41	IPR017930	Myb domain
SuperFamily	SSF46689	1.3E-7	3	40	IPR009057	Homeodomain-like
Pfam	PF00249	1.0E-6	7	35	IPR001005	SANT/Myb domain
CDD	cd00167	1.99E-5	7	37	No hit	No description
Gene3D	G3DSA:1.10.10.60	5.1E-12	7	38	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence Send to blast
MTLALRHSQF GNRWSAIAKY LPGRTDNDLK NLWHSTLRAK SCRRSSLLFA YVQLVRDCPD 60 DPTARRAAYD RAIHMTYGSG GAAGPPAQSP SPTPRNTSTE PAWQSAGGAP GPASGGWELP 120 GLGGVAPSPS VSALQGPNSA GGPDSNGSGS LRVGRILAQG ASAGGGDDAA AMHWRLPDPS 180 FASGPNSGGD AQAGNPHWRP GALNPSVSSG SVMGPSLQLP RTAPPSSANQ PTFTWQQGRL 240 VAARPRPRSS QHVTLLPMSA QEHLLRQQME ERQQLVMQEQ ALQGMQQQPQ DASGAIRTLS 300 APLDFAATAM NLPQQQTLSQ EHAQLQLQQQ APQMLSGQRL AEPRALFHQR EQQQQQQLLL 360 LLQERQQQAG QAAGYQKRAA SPFRFHQGER MAPDEEWGGH AAAPVAWHQQ QQQEHGLECE 420 SQGGVRGRIS SFFGHAASGD RGGHTASPFG AGSSHASSHA GARRPPMRQC TLPSMAPPQH 480 PLWQQWAQDD VQQQPEQQQP HHHHQHPRMR PLSAPVGAVA GTVAPEALQY RGMGVAAASA 540 APNVPPPPNQ LHLQSAKRHV GVVYDPLDEL MEELDRAQAS GGLLQHVKAI ARGHGRHAGL 600 MAAAAAASPA DGWAAERPAS GLQQQFVPPP QQQQVERHQA LAPWGGGDAY AGRAGEGGFA 660 LGGVQQPRHM SGPSWMRQVP ALGVVRTDAA VTMGLGEEDL STCLGALGAL RD

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence Send to blast

MTLALRHSQF GNRWSAIAKY LPGRTDNDLK NLWHSTLRAK SCRRSSLLFA YVQLVRDCPD  60
DPTARRAAYD RAIHMTYGSG GAAGPPAQSP SPTPRNTSTE PAWQSAGGAP GPASGGWELP  120
GLGGVAPSPS VSALQGPNSA GGPDSNGSGS LRVGRILAQG ASAGGGDDAA AMHWRLPDPS  180
FASGPNSGGD AQAGNPHWRP GALNPSVSSG SVMGPSLQLP RTAPPSSANQ PTFTWQQGRL  240
VAARPRPRSS QHVTLLPMSA QEHLLRQQME ERQQLVMQEQ ALQGMQQQPQ DASGAIRTLS  300
APLDFAATAM NLPQQQTLSQ EHAQLQLQQQ APQMLSGQRL AEPRALFHQR EQQQQQQLLL  360
LLQERQQQAG QAAGYQKRAA SPFRFHQGER MAPDEEWGGH AAAPVAWHQQ QQQEHGLECE  420
SQGGVRGRIS SFFGHAASGD RGGHTASPFG AGSSHASSHA GARRPPMRQC TLPSMAPPQH  480
PLWQQWAQDD VQQQPEQQQP HHHHQHPRMR PLSAPVGAVA GTVAPEALQY RGMGVAAASA  540
APNVPPPPNQ LHLQSAKRHV GVVYDPLDEL MEELDRAQAS GGLLQHVKAI ARGHGRHAGL  600
MAAAAAASPA DGWAAERPAS GLQQQFVPPP QQQQVERHQA LAPWGGGDAY AGRAGEGGFA  660
LGGVQQPRHM SGPSWMRQVP ALGVVRTDAA VTMGLGEEDL STCLGALGAL RD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A150G849	0.0	A0A150G849_GONPE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP9880	3	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25560.1	4e-11	myb domain protein 18