PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ46020.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family B3
Protein Properties Length: 106aa    MW: 11681.6 Da    PI: 8.4995
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ46020.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.49e-121598286
                EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
          B3  2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
                +k+lt +d ++s+ + lp+  a+ +  ++ +++s  l+l de g  We+ +  + ++g+y l+     F++a+g++ g f++F+ d+
  KXZ46020.1 15 VKKLTVNDGFTSKSVKLPRAEARFFmgELRNRQSLSLVLLDEAGGCWELLC--TCTGGQYALS-RVGAFCEAHGVRPGAFFIFYADH 98
                699999****************9999988899*******************..8888999999.89******************665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.0E-61099IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.26E-811100IPR015300DNA-binding pseudobarrel domain
CDDcd100177.84E-813105No hitNo description
PfamPF023624.4E-81598IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MSSHVIANAK RYLCVKKLTV NDGFTSKSVK LPRAEARFFM GELRNRQSLS LVLLDEAGGC  60
WELLCTCTGG QYALSRVGAF CEAHGVRPGA FFIFYADHEH IVIVVG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150G9J45e-73A0A150G9J4_GONPE; Uncharacterized protein