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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | KXZ47433.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 2635aa MW: 255157 Da PI: 6.5805 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 22.3 | 3e-07 | 6 | 34 | 17 | 47 |
HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 17 kqlGggtWktIartmgkgRtlkqcksrwqky 47
+++G W++I +++g ++t+ q++s+ qky
KXZ47433.1 6 RLYGRQ-WRKIEEHVG-TKTAVQIRSHAQKY 34
678866.*********.*************9 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51294 | 16.041 | 1 | 39 | IPR017930 | Myb domain |
| CDD | cd00167 | 0.00325 | 4 | 35 | No hit | No description |
| SuperFamily | SSF46689 | 3.49E-6 | 4 | 40 | IPR009057 | Homeodomain-like |
| Pfam | PF00249 | 1.0E-5 | 5 | 34 | IPR001005 | SANT/Myb domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 2635 aa Download sequence Send to blast |
MTTGLRLYGR QWRKIEEHVG TKTAVQIRSH AQKYFNKLEK GGGGEEAIEV PPPRPKRKSA 60 PRADGAGAGA GAGAAAAGAG AGTDGGEFGS DGEAGMQAPD DCAPAAELQA LQLQQLKAES 120 PSLPPLGLAA LPALAGQLSG QLQPPLGAAA GTQDLLQRMQ APGAGQQQSQ PPQHGVLGLP 180 PLPRAPSLPL QGQHPPQQQQ LLLQAPGLTG LLPVQPHQQQ HQHQQQQQQQ QPMLPPQPQL 240 HQQQQQSGGG PVPTLADSIA RNIAMNMAQW AHAQVAGHAQ EGPGGPMGQP SAAGPHGLTP 300 DRQTVEAVAA AAAAAAAAAA TAVISAAGEA IQRRIQEKAA AGFLPFLVHP LAELIPPTLA 360 ASASAATTSD QSAPPWAVPP PQQSLMRVLA ASSSGRGGAG TGPAAGYPQS QSQQHSQQRT 420 QPFSLDQGAP SGLGGLTTGS DPLTREETTA GQVTATPGSS QQQQAVSGPH NSPQHMSPSF 480 AICAAQGGAG LGSGGGGGGC ATGSGSVGLG VNSTSLLRLA SLGAPSISLA ATGGSLGGGA 540 TAAGSADGGQ QGSQPMAWEM AQQAGMELGS MGARGHPGSM TGMGAAAATL RVLGGLPAPW 600 DDQLQQLQLQ QLQQQQQQLH HQQQHLQQQQ EALGRFMGAY GDGSNIFSFD AAQQMATAAA 660 AVGAEGLQAS AGGGGRDAQR QLSPPPPPQR RDSRLGMLPA AQPQPMSAVQ PPLTAFPLLR 720 PPGAALASPY TTPGAMAASG PALFDPRVRA RELQQRQAEE PQAMQLDAPE AAATDPRVAG 780 RVSHATQPRV QWDDAPDVGG KREPVEEEAR ELQPGRGCRR AVPAQDGVDA AAAPDGSRRA 840 AGAGQQRPAG MAIGTGSGSG LCLALMDSGW ADEFGAAASG DGGYQLGQLQ YLQQQSGPGL 900 SGTTGSALNS LQEVLAGPDL TAMVPLLVPS SGATSAQPDA GGGSGGGAAA ASARATVAAA 960 AAHAARLHAS TSGDQTTQNN QHHHQPHAQQ QHGGDGQHGR TAAVRWSQIQ VPGGPQKAQQ 1020 QGTDAGSGGN TTTDVNAYIR DFSLVSPSGG QQPPLSSSGP SSLPSTQQLR NGGDAAAPPL 1080 QPPAAAAAAG RSGSDAVAPG TAAAAAARGT EAGASNFGSG SGAAAEGMVV DGRQSSGPTG 1140 LLARQYGNRQ ETPPVGVSGG TRQGVSPSPG PCGPSGYQAS GPAATGHGSG AGDDTGTGPA 1200 AAGGGLVSGS GSGSDGAGRG GGDGNGDRPA GQGASGIGGS TLAPLNKQQK RHQQQRTVGE 1260 SEREQSAEAG PQDAPAPLAA SGGAGGKGEG GGAAAADEEA DAQGAARRRQ GCADPESNLA 1320 AAAAAVGGGA SAAADAAGLQ QRQGSQEPRP GGGPRQSPDS PIKRQPSQQR GPQPPPPASA 1380 PSQQQLRSAA VPQPTPAAAG AETLALLQRM LMLQQLQAQS DQTVSPQPPS LMSTLAGLSA 1440 GAQAVANMLA LQQQQQQQQR QLEAVLSEPV PRQPLALPPT AAGPETMSTD AGGSAADADG 1500 GGGPMAAARL ELLQSTAEAA AAAPEGLAAL LPYLCDRGAV GSEQIAQLEE MARALQYASS 1560 LAGPLAAVLQ RPALQRAFGA GVASQGSGGA LPPAGQCDED GGADARTAAQ QCPPAVTSDA 1620 EAPEAEGPLA SGDGPLGAAH AAGRAPSARG AAAAGESRQP PQGAPPGLFP GASSDPGLAS 1680 LLLHWHAAAA ASYGYGLHPL VRPQQQPQLE ESMLAAAAVA AAPSFLPHPP HPLLMQQHYM 1740 KQHLAAAALG LSLGGGGGGQ ASRGQSTEQE RKAARRAATT AEISGRTSGG ADGSAGNAAA 1800 AVAAANAANQ AAAPQRGRVQ GPGSGQPQAA AFDAGLGSGG GAAGGHWRGA SAGVPSDPRL 1860 SSGGPRRSSG DGGGGAGAGG FRQPPRPVPN FADAAAAAAA AAVRVMSGGA DGGAGSDKGG 1920 AAGAGGSGKR SLGDVYGNAH AAAAAQRPSR HKAARRRHHR GCSPQRSVGS GASSSGFHGG 1980 GDKSGGEEAH HCPRPSREYG NQDGGALAGG AAAQNAAADQ QDTATSSGGK DGHGSGAGGG 2040 AGCGVHGGGA GGAAGLMLPP KKHMRSGHDP RAPGGGGAAG SGGAAAAGGG GAAAAAGRQA 2100 HLQKDATPSG AGSGGSGGGS IGGNKSGTSN DAYDGSMNAS DEGSNEPGSA PADGPMGQPL 2160 PPSDGEGRLG MGAGRDGDGV NVQGMVVAGA AIIAGGARSF SVAQPDPLSG GAAAAPGGGA 2220 SGPAAGAGHK RQRFELPAGQ AAPPEAAPVG TSSEEAAGGK QAGGGSADGP PPHKVHRTGP 2280 ASGPHGAAGV DVNTTSAGAA ADAAAAAGGD SGGDVDMDDA ADAADATRAV GREPQPQARP 2340 AGSLPSQLAY VLEQGSSKQG GDTGHNNSGT GPRSGVGSNE GALGGNGGGR CRSNEGGNGN 2400 GSQGNGSQGN GNGSHGNGSN GNGSHGQGSN GNNGNGSNGN GASTNLPGSG HHAYFRWPGG 2460 GALHRGGGGA GGAGAGGGSR ADAGGGGAGG SGAADGSGGG ADGRIAAAGS GGGVDGASGG 2520 DRLSPYDDGG AAAGAATPPE DHHHHHSHHG RGERRNQEGT SMRTQTPQDS DQDPERRLGD 2580 ASWQQHALPY RHHQPDAVGE GALGRGAAGH GAQAEGGAAG GGGLGPDEAA DNGGQ |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 2257 | 2264 | GGKQAGGG |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| TrEMBL | A0A150GCD7 | 0.0 | A0A150GCD7_GONPE; Uncharacterized protein | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Chlorophytae | OGCP454 | 14 | 27 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G01060.3 | 4e-14 | MYB_related family protein | ||||
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