PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ48251.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family SBP
Protein Properties Length: 230aa    MW: 24354.3 Da    PI: 6.6696
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ48251.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP23.81.2e-072403674
                TTEEEEE-TTTSSEEETTT--SS--S-STTTT------- CS
         SBP 36 sgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrr 74
                +g++ rfC qCs+f ++s f+ ++r+C ++L++  + r 
  KXZ48251.1  2 DGRSVRFCDQCSKFEDISLFEGSRRTCNDKLERTRQARS 40
                67889**********************999987654442 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5114111.451142IPR004333Transcription factor, SBP-box
SuperFamilySSF1036126.8E-7242IPR004333Transcription factor, SBP-box
Gene3DG3DSA:4.10.1100.109.7E-7228IPR004333Transcription factor, SBP-box
PfamPF031104.8E-9239IPR004333Transcription factor, SBP-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MDGRSVRFCD QCSKFEDISL FEGSRRTCND KLERTRQARS DKRRRLSEHA RRAALRLQAR  60
RVAPYSGASI AGKRSHSGLY GLYGEDDCDD DEDWELEASG VLPLRGPPSK RTRELSPFAL  120
PLAHLPLGPL PPLPVNCLAA DADGLQAEGE EGRQDALKTL VGAFRSAVSS SGGRGLADVA  180
ALLLAELDAA ANQQGVQLRP VEASAGAAHE APLAAGGGPL PITSAHGSPL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14145KRRRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150GEG31e-161A0A150GEG3_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP2012101