PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KXZ50625.1

Organism

Gonium pectorale

Taxonomic ID

33097

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium

Family

MYB_related

Protein Properties

Length: 837aa MW: 85433.3 Da PI: 9.5848

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KXZ50625.1	genome	GPGRP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.2	1.2e-10	4	32	18	48
HTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 18 qlGggtWktIartmgkgRtlkqcksrwqkyl 48 +G++ W++Ia++++ gRt++++k+rw++yl KXZ50625.1 4 TFGNK-WSLIAKELP-GRTDNMVKNRWNSYL 32 58999.*******.***********97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00167	3.73E-7	1	32	No hit	No description
PROSITE profile	PS51294	20.138	1	36	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.7E-13	3	33	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.88E-9	3	37	IPR009057	Homeodomain-like
Pfam	PF00249	4.4E-9	4	32	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 837 aa Download sequence Send to blast
MQATFGNKWS LIAKELPGRT DNMVKNRWNS YLKKRVEVGR ALALTLSVGY TIVSGAAGGG 60 GEAAAAMVAD GAAAMVADAA AAAAGMPLAQ PALPQLPAAQ QQGLTPEQQQ ALAALQHQQL 120 QQQGQQQQQQ QHLQAAAAMA TLASPRRRRS GDGWATATSE GRERQRRSME VHSTGPAGGG 180 GGGSMSGGTR SGSRSGLRSS SRGRGGSRAG AGHAPAQQPP VAPEATGSGV FAVPAAAAAT 240 ALRRLAARAS ATAALGPGFA ANSGAGAGFA HPLLGALPPG MIPSPATTPP IPGTAAGTSP 300 FDTGVAFGSM SAGGAGAGLP GGGYPLGLVA GGAGQPGVGS AFALQHYPTA DGALTLKLEH 360 QMSQHLTQQQ QQQQQQPQQL PLQHQASQPL SRQQSQQLPP QPQRQMSQPL QHVHSGMLPP 420 PPPLPQQPPP SPMDYAVSHS PAALPTAFAP APASTQWQPP VLPAPVNPPP HAQQTQPPLP 480 QQKQDVRPED ALPETEKDAQ RLALLQQYFV QSGMPAEQAG VAAVAMLRLF KHQSAEADRA 540 AQQQAAEVAA AAAQLRAAAP AMPVQQLQAA ALQQQHQQQM AAAMAAAAAA QHQQQHQHQP 600 QQSSFAYSFF GAQAQAQAQA QAQAQAQAQA QAQAQAQAQA QAQAQAQAQA QAQAQAQAVP 660 HAAPFAASHA PPHDATHFGG MQMQMLTAAG SAAAADSMQW EAHAGQPQPH AQPQQHLLAA 720 GFGHLQPPAP PLNASHPSNP RPQQQQQPAA PALDHDSLDF LSGLVMGGSH DGHDAFAGLG 780 MLCDNPLGAP TPPDLSPLTG SMSDLAAAAA AVTTRAITSS SIATTSRTMA SERSGVR

Sequence ? help Back to Top

Protein Sequence Length: 837 aa Download sequence Send to blast

MQATFGNKWS LIAKELPGRT DNMVKNRWNS YLKKRVEVGR ALALTLSVGY TIVSGAAGGG  60
GEAAAAMVAD GAAAMVADAA AAAAGMPLAQ PALPQLPAAQ QQGLTPEQQQ ALAALQHQQL  120
QQQGQQQQQQ QHLQAAAAMA TLASPRRRRS GDGWATATSE GRERQRRSME VHSTGPAGGG  180
GGGSMSGGTR SGSRSGLRSS SRGRGGSRAG AGHAPAQQPP VAPEATGSGV FAVPAAAAAT  240
ALRRLAARAS ATAALGPGFA ANSGAGAGFA HPLLGALPPG MIPSPATTPP IPGTAAGTSP  300
FDTGVAFGSM SAGGAGAGLP GGGYPLGLVA GGAGQPGVGS AFALQHYPTA DGALTLKLEH  360
QMSQHLTQQQ QQQQQQPQQL PLQHQASQPL SRQQSQQLPP QPQRQMSQPL QHVHSGMLPP  420
PPPLPQQPPP SPMDYAVSHS PAALPTAFAP APASTQWQPP VLPAPVNPPP HAQQTQPPLP  480
QQKQDVRPED ALPETEKDAQ RLALLQQYFV QSGMPAEQAG VAAVAMLRLF KHQSAEADRA  540
AQQQAAEVAA AAAQLRAAAP AMPVQQLQAA ALQQQHQQQM AAAMAAAAAA QHQQQHQHQP  600
QQSSFAYSFF GAQAQAQAQA QAQAQAQAQA QAQAQAQAQA QAQAQAQAQA QAQAQAQAVP  660
HAAPFAASHA PPHDATHFGG MQMQMLTAAG SAAAADSMQW EAHAGQPQPH AQPQQHLLAA  720
GFGHLQPPAP PLNASHPSNP RPQQQQQPAA PALDHDSLDF LSGLVMGGSH DGHDAFAGLG  780
MLCDNPLGAP TPPDLSPLTG SMSDLAAAAA AVTTRAITSS SIATTSRTMA SERSGVR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	168	GRERQRRSM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A150GLK7	0.0	A0A150GLK7_GONPE; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35515.1	2e-10	high response to osmotic stress 10