PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ50939.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family ERF
Protein Properties Length: 301aa    MW: 32961 Da    PI: 6.4479
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ50939.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-1962112256
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 gy+GVr+++ +g+++AeIrd       + kr ++g+f t+eeAa+a+++a+++l+g+
  KXZ50939.1  62 GYRGVRRRP-WGSYAAEIRDaA-----CgKRRWIGTFKTPEEAARAYDEAALALHGP 112
                 8********.**********55.....56**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.95662119IPR001471AP2/ERF domain
SMARTSM003803.4E-3062125IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-2062120IPR016177DNA-binding domain
PfamPF008471.1E-1262111IPR001471AP2/ERF domain
PRINTSPR003678.3E-96374IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-2763118IPR001471AP2/ERF domain
CDDcd000182.66E-2663118No hitNo description
PRINTSPR003678.3E-985101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MRLMLNRHME SFQQGNSCFT EEHVAASRKR ARDVDPDYEA EAATSHRFGQ QVEGSGSANK  60
VGYRGVRRRP WGSYAAEIRD AACGKRRWIG TFKTPEEAAR AYDEAALALH GPRAKTNFVY  120
DCQKQAASPN KAGVQVQHVT HRRKSDDSDC SATSIEALPA AVDLPLGMGL DLGLGLGLAP  180
LPLPMPVALP VPMASLHELP SSPLLPPQLL PEEDAAEDSQ LHLLPPYYHS LGYRSHVGQH  240
QHSARQPVRP KREQQGEEHE GGEGLQAGEG EEGQADVRQS RLLEALVEVA LLFGQRDFAM  300
V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-17631181571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150GM590.0A0A150GM59_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1321540
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.16e-15ethylene response factor 7