PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ52316.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family MYB_related
Protein Properties Length: 293aa    MW: 31979.8 Da    PI: 9.5129
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ52316.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.4e-09223267246
                      SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqk 46 
                      g WT+eE+el++   +++G g  W + a++++ +R ++qc  ++ +
       KXZ52316.1 223 GEWTQEEHELFLATARKWGVGdKWGLFASYIP-NRVGYQCSQYYTQ 267
                      78******************************.*******999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500908.165217269IPR017877Myb-like domain
SuperFamilySSF466896.65E-9220268IPR009057Homeodomain-like
SMARTSM007172.5E-4221271IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.3E-7222268IPR009057Homeodomain-like
PfamPF002497.0E-7223267IPR001005SANT/Myb domain
CDDcd001675.96E-6224269No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MDTTNEEEMP QLDRERAERM RRNAEMLAKI GVADALRDVA RAQATERAGG EPGTSGRGAV  60
RQAPRPKRAR TEAVEPTRRS SRLASGPTNQ GTTEAGEAAE AAGVDEEGKM RAGKGVGIMT  120
QEEYLASKGL PLPEGHFKTN GVFRGWVAPD VIDKFGLASS ADEAWAQGGG GAFKRKITKA  180
DVPEHLRAKG WSTAKAFAAS QLHKNPNAYF YRHVAPGNAQ AQGEWTQEEH ELFLATARKW  240
GVGDKWGLFA SYIPNRVGYQ CSQYYTQVII PSGIVIDPRF RMDSWGDAVF TGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002945768.17e-98hypothetical protein VOLCADRAFT_115695, partial
TrEMBLA0A150GR160.0A0A150GR16_GONPE; Uncharacterized protein
STRINGXP_002945768.13e-97(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP463677