PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ53053.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family ERF
Protein Properties Length: 552aa    MW: 54990.9 Da    PI: 7.5702
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ53053.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.51.4e-123382155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s+y+GV+w++k++rW A I        +++++lg+f ++++Aa+a ++a+ kl+g
  KXZ53053.1 33 SQYRGVCWNRKNKRWQAAINSG-----KRYVYLGSFLSEYDAARAFDKAAVKLRG 82
                78****************8884.....6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.11E-133392IPR016177DNA-binding domain
PfamPF008471.3E-63382IPR001471AP2/ERF domain
CDDcd000187.70E-153392No hitNo description
Gene3DG3DSA:3.30.730.103.8E-153491IPR001471AP2/ERF domain
PROSITE profilePS5103215.4613490IPR001471AP2/ERF domain
SMARTSM003807.6E-163496IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    Send to blast
MRGSRAAVVD EDYEIGADGE DTRAAGSDKQ LTSQYRGVCW NRKNKRWQAA INSGKRYVYL  60
GSFLSEYDAA RAFDKAAVKL RGMRAKLNFP YSEYVDENGN LLEDPKMKDV MYKIDAVHGT  120
GDHAGGGSGG RSGGRHTNAG GGGGGAGGAG GAGGGGSGVA AGDDHSGLSE GQMLQLPIPL  180
PGLSAPQGYD AVAGGGASAA PAAMHQAAAG GGSRRRQPSP LQLAAVGPAG RATTSSDGGT  240
GPEWRMQGGA GGTGMPPGGH GPALWPPAHP SSGYPSDNTP YHAFPEPVTT GPPNLGAGGG  300
LAAPTRGSLS AGSGWGGRPR QDALGAGAGL GMNPAAGGPD GGPVAPTLHL GEAPGGGSAA  360
AAAGAPPLPG SIAVGASGSS LHRTILRELP GGCTLLSLVP NRFANSKEDM CGAIYLDCAA  420
PNQFGSSVWT GNSIIKMGLY DTERDARQAA IKCMQLYWAF CSDEWRVDFY NALAAMSGAA  480
GMAGPGQAQG CGGARPPDAK RQRLEGPGAS SGGAAGSGGD ASGDLGGEVR AAHRMQLPQL  540
VRQLQEVAAT GS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150GTB10.0A0A150GTB1_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP3683512
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.18e-12AP2 family protein