PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ53152.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family ERF
Protein Properties Length: 194aa    MW: 21667.1 Da    PI: 7.0603
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ53152.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.62.7e-121862150
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50
                s+y+GV++   ++rW+A+ r    ng  k  slg f+ +eeAa+a+++++
  KXZ53152.1 18 SKYRGVHQTFPTKRWEAQFRR---NG--KPTSLGCFDHEEEAARAYDKMM 62
                89****************555...54..*******************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.3E-81863IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-101864IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.0E-91970IPR001471AP2/ERF domain
SMARTSM003808.9E-51987IPR001471AP2/ERF domain
PROSITE profilePS5103211.8511981IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MLRAVKSKAN GSGRTYTSKY RGVHQTFPTK RWEAQFRRNG KPTSLGCFDH EEEAARAYDK  60
MMLWCELHNA SGVKSGITNF DSTEYEKEFA WLQVVSQDEL IEALRSEGRR QAAHRMMRQK  120
REGQVEAATD DYDDREEPQP QRPGRQPTPQ PGAGAGAGRH VVQLQQQQLL ITSGAGVDAA  180
AASLLVSDEF LVDG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002956385.18e-82hypothetical protein VOLCADRAFT_97414
TrEMBLA0A150GTU41e-143A0A150GTU4_GONPE; Uncharacterized protein
STRINGXP_002956385.13e-81(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP27461414
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25730.11e-09ethylene response DNA binding factor 3