PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ53699.1
Organism
Gonium pectorale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family ERF
Protein Properties Length: 788aa    MW: 78119.8 Da    PI: 4.7451
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ53699.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-19417466255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+++AeIrdp+++    r +lg+f+taeeAa+a+++a+++l+g
  KXZ53699.1 417 RFRGVRQRP-WGKYAAEIRDPVKG---GRTWLGTFDTAEEAARAYDNAARALRG 466
                 69*******.**********7654...7************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.15E-26417474No hitNo description
PROSITE profilePS5103222.787417474IPR001471AP2/ERF domain
SMARTSM003803.2E-35417480IPR001471AP2/ERF domain
PfamPF008471.8E-11417466IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-30417475IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-21418475IPR016177DNA-binding domain
PRINTSPR003671.3E-9418429IPR001471AP2/ERF domain
PRINTSPR003671.3E-9440456IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 788 aa     Download sequence    Send to blast
MDLSTGHPVG PSHLIKLSSV LEGSFESTAA LMRERQQRQQ QQQRQQQQQR SGPALSHPPP  60
PTQQQHAAEV RGGAGEARGG AAAGSVVGSA AWADELAAAA VNGGSRALNA TAVALAQAMR  120
NGGDEAAAAL TALHAFRRLD SKRLPLDERQ LMGWPGAAAA GLLLDREPSD DRGGASAGVR  180
VKRSDSVDRA DVGPVQLGGG RGGGGGERDG WEQQGRPGQT GGRAAGAAAG AGAGAGAAAG  240
HRAGGAVRQG GGGEAPFKLP IDDPFYRQQV EAMAAALGLS PQRATQLVLS HQQQLAAEDE  300
ARLAEAEAEL GEAAAMAAAA EAEAGAGPSG GRAASPAGGA TESVGATAGS GPRGAAGAEG  360
EGALAGSDAE ADEGDAGGEG RTDGDTSPNG AGGGRGQGGG GKARMGGIPA VGRGAVRFRG  420
VRQRPWGKYA AEIRDPVKGG RTWLGTFDTA EEAARAYDNA ARALRGPGAR VNFPLADGEV  480
PPPMTGVLPA VGGGGSGGGA GARGGDDGSG DEGPDGDDAP PSQPVMPAHE LRGLDVIALA  540
AELAAAEQAE LEQAEAERQR AAKRPRESSK AAAAAAGTRG SGHGTAAKRQ QRHKAAAAAA  600
APSAGPQAMD AEDEWIGPDS RRVNAPGREE SDGGQQHRQQ TEGLTPADLL EAALAAGDAL  660
DALAAEAEAE AHVAEGTEDA GGDSHRGPEG PEGGREFVGD LHSAVEAEGD TQAAAHDDRR  720
PLPPQEQQEG GRDPGQEEQR AAGSQGVGGM AAPEREQQAA CLSPRNDGAA LAAAAAAAVA  780
AGGTPRAC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-204174741472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1392400GGRGQGGGG
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00542DAPTransfer from AT5G44210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150GV350.0A0A150GV35_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1321540
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.12e-12cytokinin response factor 1