PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14001.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 258aa    MW: 29659.6 Da    PI: 8.161
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14001.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.11.8e-28170229159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ ++++ pr+YY+C++a  C+vkkkv+rs edp+++++tYeg+H h+
  KZV14001.1 170 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApICSVKKKVQRSVEDPSLLVVTYEGKHYHH 229
                 58***************************99***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081124.558165231IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.7E-27165229IPR003657WRKY domain
SuperFamilySSF1182901.31E-23169230IPR003657WRKY domain
SMARTSM007749.0E-30170230IPR003657WRKY domain
PfamPF031064.8E-23171229IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MLNQIDRVER DLASSSYGLL LNFLPLAFER MEKGHLFNGN CLIDLNSNPM QNPDESLNSE  60
FEDNFTGHAR GFSLKDTEEL DRLISENKKL HDMLATLIKN QNDWVQKQCN SGEECSRKRK  120
HDDSNFVEKK CCNQACWEEC WSHGTPKGIK PNASKKVLVR VDPSDMSLVV KDGYQWRKYG  180
QKVTRDNPSP RAYYKCSFAP ICSVKKKVQR SVEDPSLLVV TYEGKHYHHY HHHSSLQSET  240
AGVSLQARFP VTLLRVLI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-191692281674Probable WRKY transcription factor 4
2lex_A5e-191692281674Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14001.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081961.12e-57probable WRKY transcription factor 40
TrEMBLA0A2Z6ZY600.0A0A2Z6ZY60_9LAMI; Putative WRKY transcription factor 40-like
STRINGMigut.E01464.1.p5e-47(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45002242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.13e-36WRKY DNA-binding protein 18