PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14284.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 218aa    MW: 24940.2 Da    PI: 6.5303
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14284.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.82.1e-1961113456
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 + +++++ql+ Le+ F+++ +++ +++ +LAk lgL+ rq+ vWFqNrRa++k
  KZV14284.1  61 KKRLSTDQLDLLENSFQEEIKLDPDRKMKLAKDLGLQPRQIAVWFQNRRARWK 113
                 55699***********************************************9 PP
2HD-ZIP_I/II120.21.1e-3860151293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  kk+rls++q+ lLE+sF+ee kL+p+rK++la++Lglqprq+avWFqnrRAR+k+kqlE  y++Lk+++d++++e+++L++ev +Lr++lk+
   KZV14284.1  60 KKKRLSTDQLDLLENSFQEEIKLDPDRKMKLAKDLGLQPRQIAVWFQNRRARWKAKQLELLYDSLKQEFDNVSREKHNLQQEVFSLRATLKD 151
                  9**************************************************************************************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.99E-1946117IPR009057Homeodomain-like
PROSITE profilePS5007116.56855115IPR001356Homeobox domain
SMARTSM003896.9E-1858119IPR001356Homeobox domain
CDDcd000865.35E-1760116No hitNo description
PfamPF000461.7E-1661113IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.6E-2062122IPR009057Homeodomain-like
PRINTSPR000311.2E-58695IPR000047Helix-turn-helix motif
PROSITE patternPS00027090113IPR017970Homeobox, conserved site
PRINTSPR000311.2E-595111IPR000047Helix-turn-helix motif
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MDWKGNFRVP FVPRVPDPSP FSFLYSYNYD HYPAGLEMKQ QSVPGLMDNK SCNVIGQDPK  60
KKRLSTDQLD LLENSFQEEI KLDPDRKMKL AKDLGLQPRQ IAVWFQNRRA RWKAKQLELL  120
YDSLKQEFDN VSREKHNLQQ EVFSLRATLK DQAAKKQVSK AYTEVSGEET VESTSLPSCD  180
KSGGNGNQIP ECSYALNVDD FNPVMMGAAY WADMPSCS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107115RRARWKAKQ
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14284.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094442.17e-97putative homeobox-leucine zipper protein ATHB-51
SwissprotQ9LZR03e-51ATB51_ARATH; Putative homeobox-leucine zipper protein ATHB-51
TrEMBLA0A2Z6ZYE91e-162A0A2Z6ZYE9_9LAMI; Homeobox-leucine zipper protein ATHB-51
STRINGMigut.J00491.1.p2e-94(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38692246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.17e-44homeobox 51
Publications ? help Back to Top
  1. Andres RJ, et al.
    Modifications to a LATE MERISTEM IDENTITY1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.).
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(1): p. E57-E66
    [PMID:27999177]
  2. Vuolo F, et al.
    LMI1 homeodomain protein regulates organ proportions by spatial modulation of endoreduplication.
    Genes Dev., 2018. 32(21-22): p. 1361-1366
    [PMID:30366902]