PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14291.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family FAR1
Protein Properties Length: 248aa    MW: 28507 Da    PI: 8.4609
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14291.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1798.9e-2512106190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                 +fYn+YA+e+GFs r+s+skk+k ++e+++++fvC keg+++e +++    +ek++r+r   rtgCk ++ + k +   +w v+++ + HnH+l+
  KZV14291.1  12 SFYNQYAREAGFSARISNSKKNKGTNEVVWKKFVCFKEGRTSEWNNQakvgQEKQERSRGGVRTGCKSRISIVKVQtGPNWAVSNFIESHNHPLS 106
                 5****************************************99988889999999999************998888799**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.4E-2212106IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
GMEFTSIEDA FSFYNQYARE AGFSARISNS KKNKGTNEVV WKKFVCFKEG RTSEWNNQAK  60
VGQEKQERSR GGVRTGCKSR ISIVKVQTGP NWAVSNFIES HNHPLSTPSK VHLLRSHRNV  120
SAAKKSLTQQ FSEANVPTCQ QMQLLEIEYG GLERVGCTER DIRNFETALR DEQKGIDAET  180
LIEFFESEKD KNSSFFFTYE TDSENRFSRC FWADPVLRKA YIVFGDVVVF DTTYNTNRYG  240
MIFAPLLF
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14291.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015878435.11e-109protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2Z6ZZ160.0A0A2Z6ZZ16_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_006428864.15e-80(Citrus clementina)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-48FAR1-related sequence 5