PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14558.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family bHLH
Protein Properties Length: 221aa    MW: 25267.8 Da    PI: 9.22
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14558.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.94.2e-1453105155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 +r+ h e Er+RR+++ + ++ Lr+llP       ++K s ++  ++Av+YIk++q
  KZV14558.1  53 KRVLHRETERQRRQEMANLYASLRTLLPLeY---IKGKRSVSDHMQEAVNYIKHMQ 105
                 7999*************************77...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.31E-1451116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.16452104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-1153105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.3E-1053116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.08E-1153109No hitNo description
SMARTSM003531.9E-558110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MFPLQPSGEL VFVAPSSHPD EVILHNQIAN HALPDNNNIK ETRRKRIDEC NTKRVLHRET  60
ERQRRQEMAN LYASLRTLLP LEYIKGKRSV SDHMQEAVNY IKHMQKRIQE LKMRREKRSN  120
FSGTKIGSSN SDEKSVNFVE VTQGRDGVEI LISSGCNSFG LGPGLSGVLQ ELQASGLNVV  180
SCLSTKENDR RFLHRIHAEL VDDVKHIEIP VMQERLIHLI N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15264KRVLHRETERQRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14558.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022866517.12e-59transcription factor bHLH36-like
SwissprotQ9FLI13e-40BH036_ARATH; Transcription factor bHLH36
TrEMBLA0A2Z6ZZ101e-161A0A2Z6ZZ10_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-42bHLH family protein