PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14591.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 216aa    MW: 24444.6 Da    PI: 10.3332
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14591.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.3e-1995148255
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                 rk+ +++k+q + Le+ F+++++++ ++++eLA+kl+L+ rqV vWFqNrRa++
  KZV14591.1  95 RKKLRLSKDQSTLLEDSFRQHSTLTMAQKQELAEKLNLKPRQVEVWFQNRRARK 148
                 677889**********************************************95 PP
2HD-ZIP_I/II76.93.4e-2595149155
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtk 55 
                  +kk+rlsk+q++lLE+sF+++++L+  +K+ela++L+l+prqv+vWFqnrRAR  
   KZV14591.1  95 RKKLRLSKDQSTLLEDSFRQHSTLTMAQKQELAEKLNLKPRQVEVWFQNRRARKN 149
                  69***************************************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.61E-1787147IPR009057Homeodomain-like
PROSITE profilePS5007116.53691151IPR001356Homeobox domain
SMARTSM003898.6E-1693155IPR001356Homeobox domain
PfamPF000463.4E-1695148IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.2E-1895147IPR009057Homeodomain-like
CDDcd000865.14E-1695147No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MEETDVSSNM KLGLDLRLGL SKYEPKTDNS KKNKRVFFLD LSIPHHPSDL DHHARYSSSS  60
CVDIMQETMK QTRKKGIFSG GCKEDDDMNY SNCCRKKLRL SKDQSTLLED SFRQHSTLTM  120
AQKQELAEKL NLKPRQVEVW FQNRRARKNI SASAAHIGSN DSSGVSPAVV QSNSKRVGHL  180
QNVLFVRENL KSGGCRGRHH RGVQTKQAHH LNGLNS
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14591.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022871793.17e-39homeobox-leucine zipper protein HAT9-like
TrEMBLA0A2Z6ZZV71e-160A0A2Z6ZZV7_9LAMI; Uncharacterized protein
STRINGMigut.K00228.1.p5e-37(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17460.11e-23Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein