PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14641.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family MYB_related
Protein Properties Length: 587aa    MW: 66129.7 Da    PI: 6.4152
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14641.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding271.1e-08462509448
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      WT  E  +l+d+v q+G g+W++I + +     +Rt  ++k++w+++l
       KZV14641.1 462 WTISEVRKLIDGVSQFGVGSWSSIKKLFFptsAHRTSVDLKDKWRNLL 509
                      9**************************999****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.591454513IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.1E-13455512IPR009057Homeodomain-like
SMARTSM007171.8E-8458511IPR001005SANT/Myb domain
SuperFamilySSF466899.33E-16461519IPR009057Homeodomain-like
PfamPF002491.2E-6462509IPR001005SANT/Myb domain
CDDcd116604.02E-19462510No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MENEHVALGL EDGSIDVERM LVEPEDEHIS MDGVDCFPER IPKNDMDMED FSSSFGGANS  60
CLVQEEKDVP RGEVLDVIPS EVQVGYFQLK NEFSSMGEEY LLGVDFVESI TNLDYGSSEC  120
LLTSVSDCPI LRSSADTDAP WKSDQFRIME VSECQNDQLN ICSSELSDVP RCHDLETLDE  180
NISLKSPALC SLENIGNFCD FSSCSFQEVL SDEMDGRLSP TGDMYSSLKV EKDDEIWPAI  240
PDVETNRLQE EDVSAIIPAQ ARCTETLPAQ KRSRKPTQRY IDELADPILR YSKRRHEVSS  300
STSKGKCLGV QDNKKCHTGS KAIKFSAEET SVIAIQVPFG SIVQKECPKI PECDTVRGSD  360
SLNYVAKSKE SHVTPQNKKK LDEVVATIHV KKRNESVMVT SQKKRNSFLK ESPPKKRIGS  420
VTSGSQKRDD PLTALHRKKK DDCFTSEIQE EASGRRKHHR LWTISEVRKL IDGVSQFGVG  480
SWSSIKKLFF PTSAHRTSVD LKDKWRNLLK ASGIHEQHKR QGEKKRNMAW RPLPKPILHR  540
VCELAAMYPY PKGRKSKILH IHSDSPDKGA DITLSNYRRI LRSINGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1453460GRRKHHRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14641.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094643.10.0uncharacterized protein LOC105174291 isoform X1
TrEMBLA0A2Z7A0090.0A0A2Z7A009_9LAMI; Uncharacterized protein
STRINGMigut.J00525.1.p1e-167(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91551723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.14e-26TRF-like 6