PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14716.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HD-ZIP
Protein Properties Length: 230aa    MW: 26623.3 Da    PI: 9.6329
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14716.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.21.6e-1995149256
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 rk+ +++k+q + Le+ F+++++++ ++++eLA+kl+L+ rqV vWFqNrRa+ k
  KZV14716.1  95 RKKLRLSKDQSTLLEDSFRQHSTLTMAQKQELAEKLNLKPRQVEVWFQNRRARTK 149
                 677889***********************************************98 PP
2HD-ZIP_I/II112.62.5e-3695185191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  +kk+rlsk+q++lLE+sF+++++L+  +K+ela++L+l+prqv+vWFqnrRARtk+kq+E d+e+Lk+++++l+een+rL+++  eLr++ 
   KZV14716.1  95 RKKLRLSKDQSTLLEDSFRQHSTLTMAQKQELAEKLNLKPRQVEVWFQNRRARTKLKQTEIDCEFLKNKFERLSEENRRLHNQLLELRSAA 185
                  69*************************************************************************************9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007117.15191151IPR001356Homeobox domain
SMARTSM003892.4E-1693155IPR001356Homeobox domain
SuperFamilySSF466891.41E-1894161IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-1895149IPR009057Homeodomain-like
PfamPF000461.0E-1695149IPR001356Homeobox domain
CDDcd000863.03E-1595152No hitNo description
PROSITE patternPS000270126149IPR017970Homeobox, conserved site
PfamPF021832.4E-7151183IPR003106Leucine zipper, homeobox-associated
SMARTSM003403.2E-10151194IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MEETDVSSNM KLGLDLRLGL SKYEPKTDNS KKNKRVFFLD LSIPHHPSDL DHHARYSSSS  60
CVDIMQETMK QTRKKGIFSG GCKEDDDMNY SNCCRKKLRL SKDQSTLLED SFRQHSTLTM  120
AQKQELAEKL NLKPRQVEVW FQNRRARTKL KQTEIDCEFL KNKFERLSEE NRRLHNQLLE  180
LRSAAKTEKI SPPPPHTSAA TTVPASVQRL FNQIPKESAI YRTCSSCEKT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143151RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14716.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
UniProtINDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022871793.14e-66homeobox-leucine zipper protein HAT9-like
SwissprotA2XE761e-44HOX19_ORYSI; Homeobox-leucine zipper protein HOX19
SwissprotQ8GRL41e-44HOX19_ORYSJ; Homeobox-leucine zipper protein HOX19
TrEMBLA0A2Z6ZZQ41e-170A0A2Z6ZZQ4_9LAMI; Uncharacterized protein
STRINGMigut.K00228.1.p4e-53(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17460.14e-41Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein