PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV14911.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family ERF
Protein Properties Length: 233aa    MW: 25127 Da    PI: 4.8891
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV14911.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-193484255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr++k++g+Wv+eIr+p     r   r++lg+f tae+Aa a++ a+++l+g
  KZV14911.1 34 TYRGVRRRKSNGKWVSEIREP-----RspNRIWLGTFPTAEMAAVAYDVAALALKG 84
                69******************9.....4489***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.5E-283494IPR001471AP2/ERF domain
PfamPF008476.5E-123484IPR001471AP2/ERF domain
SMARTSM003802.1E-313498IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-203493IPR016177DNA-binding domain
PROSITE profilePS5103222.4453492IPR001471AP2/ERF domain
PRINTSPR003671.9E-53546IPR001471AP2/ERF domain
CDDcd000182.04E-283594No hitNo description
PRINTSPR003671.9E-55874IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MSWCDKDGSR SGSSANISPP SDGAAAAPSG RHPTYRGVRR RKSNGKWVSE IREPRSPNRI  60
WLGTFPTAEM AAVAYDVAAL ALKGKGTELN FPNSSSSLPV PASMSPRDIQ AAAASAAAAA  120
GAADALSRGG CGRINVIHVP LPENLGLDND HHFVDEDLIF NMPDVLENMA QGMMISPPRI  180
GFGDDEENVH ENTQDESLWN FSLKLTSNGY FDFCYIIECW SQVSCGNTFY NIT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1332941274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV14911.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019234502.12e-68PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR06e-49ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2Z7A0T01e-173A0A2Z7A0T0_9LAMI; Uncharacterized protein
STRINGXP_009793202.11e-66(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-27ERF family protein