PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV15999.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family Dof
Protein Properties Length: 297aa    MW: 31552.7 Da    PI: 6.9928
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV15999.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.31.7e-383998362
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                ++alkcprCds ntkfCyynny+lsqPr+fCkaCrryWtkGG lr vPvGgg+rk k+++
  KZV15999.1 39 QQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKACRRYWTKGGVLRSVPVGGGCRKTKRAK 98
                7899****************************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-263996IPR003851Zinc finger, Dof-type
PfamPF027015.1E-334096IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.2454296IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104480IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MQDLQSVGVG GDGGGGSSGR FFGGGGTDRR LRVQGHLAQQ ALKCPRCDSL NTKFCYYNNY  60
NLSQPRHFCK ACRRYWTKGG VLRSVPVGGG CRKTKRAKSK GGEGDASRER KSKAQSPSST  120
DSSSLTAATP SSNTAAVAEE GSSLSAAASD SSMKYGLSGA MFYNSNPPPN PKFDNHNQAP  180
IINHPSSSDG RIFTDIGSFD GLITSSDNAA NVIGFSMTDI TTTSYDRMSR APAAENPVPL  240
VDELKMPDMN SDALDWGSCG GMGGEDQSLF DLTAALDPSY WSQPQWTDSD HSLPYLP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00570DAPTransfer from AT5G60850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV15999.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078663.11e-86dof zinc finger protein DOF5.4
TrEMBLA0A2Z7A3J60.0A0A2Z7A3J6_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60850.14e-36OBF binding protein 4