PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV17376.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 394aa    MW: 44436.4 Da    PI: 4.7316
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV17376.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.41.2e-48111361127
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 + pGf+F+P+deel+++yLkkk++g +  l evi+e+di+++ePwdLp ++v ++++ew+fF++r kky++g++++rat+sgyWkatgk++ v+s + +
  KZV17376.1  11 MFPGFKFSPSDEELIQYYLKKKIQGFEDGL-EVIPELDICRHEPWDLPaHSVIQSDNEWFFFTPRGKKYPNGSQSKRATASGYWKATGKERGVKS-GPN 107
                 579************************877.99***************667777899*************************************9.999 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyr 127
                 l+g+k+tLvf++grapkg++t+W+mhey 
  KZV17376.1 108 LIGTKRTLVFHTGRAPKGQRTEWIMHEYC 136
                 ****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.45E-549152IPR003441NAC domain
PROSITE profilePS5100552.86911153IPR003441NAC domain
PfamPF023651.5E-2513136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MDISIGEASA MFPGFKFSPS DEELIQYYLK KKIQGFEDGL EVIPELDICR HEPWDLPAHS  60
VIQSDNEWFF FTPRGKKYPN GSQSKRATAS GYWKATGKER GVKSGPNLIG TKRTLVFHTG  120
RAPKGQRTEW IMHEYCTGDR SQDDMVVCRL RKNVEFHVGD NSGRNLSSLS NGTTAMLNVE  180
PSPILDEIDV AESSNSYNSN SVEQVDTVHE SDEKISNEFD SSTHKQGFEE EEEDFYADIM  240
KDDIIKLDYS ALNDVRASGE HESNMASEQP GQDTNKPDAV GWQSRHGKET PETSQTEPSD  300
NHKTGGGNLS IDSVPNVGSQ QAAEDSIDLI QISKYKALSM IIVLVILIIL LPFFLRGESC  360
KAFKVVIDVF KFRKWQDINW DRFLPSGTWR YQEL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-411315319165NO APICAL MERISTEM PROTEIN
1ut4_B5e-411315319165NO APICAL MERISTEM PROTEIN
1ut7_A5e-411315319165NO APICAL MERISTEM PROTEIN
1ut7_B5e-411315319165NO APICAL MERISTEM PROTEIN
3swm_A4e-411315322168NAC domain-containing protein 19
3swm_B4e-411315322168NAC domain-containing protein 19
3swm_C4e-411315322168NAC domain-containing protein 19
3swm_D4e-411315322168NAC domain-containing protein 19
3swp_A4e-411315322168NAC domain-containing protein 19
3swp_B4e-411315322168NAC domain-containing protein 19
3swp_C4e-411315322168NAC domain-containing protein 19
3swp_D4e-411315322168NAC domain-containing protein 19
4dul_A5e-411315319165NAC domain-containing protein 19
4dul_B5e-411315319165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV17376.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088938.11e-118NAC domain-containing protein 40
TrEMBLA0A2Z7A7A80.0A0A2Z7A7A8_9LAMI; NAC domain-containing protein 89-like
STRINGMigut.D02423.1.p1e-117(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41542243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.16e-78NAC domain containing protein 89