PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV17505.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family NAC
Protein Properties Length: 173aa    MW: 20079.6 Da    PI: 4.7936
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV17505.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.99.5e-2491341128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lp+GfrF+Pt+ el  +yL +k++g++l+  + i ++d+yk++P++Lp     +a+eke +fF+kr++ +   + ++rat sg W  + ++ ++++ + 
  KZV17505.1   9 LPMGFRFNPTELELY-DYLIPKLKGDPLPS-NLIVNLDVYKYDPHQLPfDqLKYAREKEGFFFTKRNSDQ---SSTTRATPSGNWTISKENIPIHR-GI 101
                 799***********9.*************9.89***************643334577899****998876...5899*****************99.99 PP

         NAM  98 elvglkktLvfykgrap..kgektdWvmheyrl 128
                 e++g k+ + f +g++p    +++ W + ey+ 
  KZV17505.1 102 EVIGFKNKFLFSSGNDPidGDQRAYWKLVEYTC 134
                 9***********9987732347999******85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-316157IPR003441NAC domain
PROSITE profilePS5100529.1759157IPR003441NAC domain
PfamPF023653.4E-1210133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MGETQDLNLP MGFRFNPTEL ELYDYLIPKL KGDPLPSNLI VNLDVYKYDP HQLPFDQLKY  60
AREKEGFFFT KRNSDQSSTT RATPSGNWTI SKENIPIHRG IEVIGFKNKF LFSSGNDPID  120
GDQRAYWKLV EYTCNPDVVS TTNKQMENLV ICKVRHKVRV EEDQVEEDEI ELS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-16611812126Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV17505.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2Z7A7L41e-126A0A2Z7A7L4_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1513268
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.19e-21NAC domain containing protein 32