PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV17704.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family HB-other
Protein Properties Length: 172aa    MW: 19882.2 Da    PI: 7.6994
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV17704.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.62.4e-192981456
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                ++++t++q+++Le+ F+ +++p+ ++r+eL  +lgL+ rqVk+WFqN+R++ k
  KZV17704.1 29 KRRHTQHQIQRLEASFKDCPTPNYRQRRELGLELGLEPRQVKFWFQNKRTQLK 81
                5689*********************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.0992383IPR001356Homeobox domain
SuperFamilySSF466897.52E-182383IPR009057Homeodomain-like
SMARTSM003893.6E-162687IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.2E-172683IPR009057Homeodomain-like
CDDcd000866.69E-152984No hitNo description
PfamPF000467.9E-172981IPR001356Homeobox domain
PRINTSPR000318.8E-55463IPR000047Helix-turn-helix motif
PRINTSPR000318.8E-56379IPR000047Helix-turn-helix motif
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MADEALHQFD DNTNVDRDIN LVDDHQPNKR RHTQHQIQRL EASFKDCPTP NYRQRRELGL  60
ELGLEPRQVK FWFQNKRTQL KTQHGHLQNV ELRAENKRLK QENMSYTAHL ENASCISCGS  120
PLAIRGNSVE EHQIRAENVR LREEIARLSA IASQYIGKPV ADSDNVPHST AL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV17704.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028785613.12e-52LOW QUALITY PROTEIN: homeobox-leucine zipper protein HDG2-like
SwissprotA2YR023e-52ROC7_ORYSI; Homeobox-leucine zipper protein ROC7
TrEMBLA0A2K3L2P48e-52A0A2K3L2P4_TRIPR; Homeobox-leucine zipper protein HDG2-like (Fragment)
TrEMBLA5C0J74e-51A5C0J7_VITVI; Uncharacterized protein
STRINGGorai.005G150100.11e-51(Gossypium raimondii)
STRINGPavir.J18262.1.p4e-52(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13806913
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.31e-41homeodomain GLABROUS 2