PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV17758.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family G2-like
Protein Properties Length: 401aa    MW: 45120.8 Da    PI: 7.3448
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV17758.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.11.5e-31250305156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k+r++W+peLH+rFv+a++qLGG++ AtPk+i+elm v+gL++++vkSHLQkYR++
  KZV17758.1 250 KQRRCWSPELHRRFVDALQQLGGAQAATPKQIRELMRVEGLSNDEVKSHLQKYRIH 305
                 79****************************************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.726247307IPR017930Myb domain
SuperFamilySSF466892.76E-17248308IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.6E-28249308IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-25250305IPR006447Myb domain, plants
PfamPF002493.1E-7252303IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MGSLVASDIS LDFRFLLGKM GSSIGRVISQ VLRDHNSPSE RISQLAEYID GLEAEKRKIE  60
AFKRELPRCM LLLETKIKQD LYVDDDFLHL GFGIVFSATV AVKEEMTQCE RSNAVPVLEE  120
FMPLKKIADE KHEKTEKIEE KDNKGRDKMN WMSSVQLWNS GNQHFDDKRT LNPDNIESCK  180
NRIAGTTSWS LVKDADGDES ALVPGLSLGT PKANNPMDEI NSSAFSSKSS FSRCADFYTD  240
NQQSQQITRK QRRCWSPELH RRFVDALQQL GGAQAATPKQ IRELMRVEGL SNDEVKSHLQ  300
KYRIHTRRVR ASTSANHPIV LGASWMLSQK QHSESSKHGS SRSGSPKCHP HLAGFSRGTS  360
FTGGESMEDE DEEKSVSRSW KNEIQLSLGD NDDVKLGKLC L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-14250310260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-14250310260Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A6e-14250303154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-14250303154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-14250303154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-14250303154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-14250310260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-14250310260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-14250310260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-14250310260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-14250310260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-14250310260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV17758.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022860939.11e-101transcription factor HHO5-like isoform X2
TrEMBLA0A2Z7C8Z72e-94A0A2Z7C8Z7_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43612443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.11e-36G2-like family protein